Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00016778 |
| length | 895 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 3 |
| gene id | XLOC_008373 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007126.7 |
| NCBI id | CM002899.2 |
| chromosome length | 48040578 |
| location | 14854666 ~ 14858189 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0051402 | neuron apoptotic process | biological_process |
| GO:0006915 | apoptotic process | biological_process |
| GO:0006919 | activation of cysteine-type endopeptidase activity involved in apoptotic process | biological_process |
| GO:0008631 | intrinsic apoptotic signaling pathway in response to oxidative stress | biological_process |
| GO:0008635 | activation of cysteine-type endopeptidase activity involved in apoptotic process by cytochrome c | biological_process |
| GO:0005739 | mitochondrion | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-040426-1303 | Predicted to be involved in activation of cysteine-type endopeptidase activity involved in apoptotic process by cytochrome c; intrinsic apoptotic signaling pathway in response to oxidative stress; and neuron apoptotic process. Predicted to act upstream of or within activation of cysteine-type endopeptidase activity involved in apoptotic process and apoptotic process. Predicted to be active in mitochondrion. Is expressed in several structures, including cardiovascular system; digestive system; lens; pectoral fin; and solid lens vesicle. Human ortholog(s) of this gene implicated in autosomal dominant nonsyndromic deafness 64. Orthologous to human DIABLO (diablo IAP-binding mitochondrial protein). |
| ensembl_id | ENSDART00000167213 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00016776 | lncRNA | upstream | 541 | 14854889 ~ 14855766 (+) | False | XLOC_008373 |
| TCONS_00018910 | lncRNA | upstream | 606378 | 14249389 ~ 14249929 (+) | True | XLOC_008368 |
| TCONS_00016763 | lncRNA | upstream | 714315 | 14141055 ~ 14141992 (+) | False | XLOC_008365 |
| TCONS_00016760 | lncRNA | upstream | 802841 | 14045121 ~ 14053466 (+) | True | XLOC_008363 |
| TCONS_00016756 | lncRNA | upstream | 1346939 | 13421514 ~ 13509368 (+) | False | XLOC_008359 |
| TCONS_00018912 | lncRNA | downstream | 490178 | 15347642 ~ 15351457 (+) | False | XLOC_008379 |
| TCONS_00018911 | lncRNA | downstream | 490178 | 15347642 ~ 15351457 (+) | True | XLOC_008379 |
| TCONS_00016790 | lncRNA | downstream | 533437 | 15390901 ~ 15394658 (+) | False | XLOC_008381 |
| TCONS_00018764 | lncRNA | downstream | 593339 | 15450803 ~ 15452516 (+) | True | XLOC_008384 |
| TCONS_00016799 | lncRNA | downstream | 772042 | 15629506 ~ 15665686 (+) | True | XLOC_008388 |
| TCONS_00016774 | mRNA | upstream | 2728 | 14850820 ~ 14853579 (+) | True | XLOC_008372 |
| TCONS_00016773 | mRNA | upstream | 4414 | 14826996 ~ 14851893 (+) | False | XLOC_008372 |
| TCONS_00016772 | mRNA | upstream | 27389 | 14826966 ~ 14828918 (+) | False | XLOC_008372 |
| TCONS_00016771 | mRNA | upstream | 189212 | 14642641 ~ 14667095 (+) | True | XLOC_008371 |
| TCONS_00016770 | mRNA | upstream | 256011 | 14592624 ~ 14600296 (+) | True | XLOC_008370 |
| TCONS_00016779 | mRNA | downstream | 3871 | 14861335 ~ 14964241 (+) | True | XLOC_008374 |
| TCONS_00016780 | mRNA | downstream | 316147 | 15173611 ~ 15218956 (+) | True | XLOC_008375 |
| TCONS_00016781 | mRNA | downstream | 375391 | 15232855 ~ 15237211 (+) | False | XLOC_008376 |
| TCONS_00016782 | mRNA | downstream | 375450 | 15232914 ~ 15237135 (+) | True | XLOC_008376 |
| TCONS_00016783 | mRNA | downstream | 401294 | 15258758 ~ 15301427 (+) | False | XLOC_008377 |
| TCONS_00016758 | other | upstream | 898457 | 13957722 ~ 13957850 (+) | True | XLOC_008361 |
| TCONS_00016757 | other | upstream | 1331319 | 13524874 ~ 13524988 (+) | True | XLOC_008360 |
| TCONS_00016731 | other | upstream | 3290798 | 11565391 ~ 11565509 (+) | True | XLOC_008343 |
| TCONS_00016719 | other | upstream | 4960321 | 9895858 ~ 9895986 (+) | True | XLOC_008335 |
| TCONS_00016712 | other | upstream | 5544829 | 9303809 ~ 9311478 (+) | True | XLOC_008326 |
| TCONS_00016791 | other | downstream | 536778 | 15394242 ~ 15401640 (+) | True | XLOC_008381 |
| TCONS_00016809 | other | downstream | 1661503 | 16518967 ~ 16519083 (+) | True | XLOC_008398 |
| TCONS_00016813 | other | downstream | 1972298 | 16829762 ~ 16829876 (+) | True | XLOC_008400 |
| TCONS_00016824 | other | downstream | 2243013 | 17100477 ~ 17101668 (+) | False | XLOC_008406 |
| TCONS_00016835 | other | downstream | 2516325 | 17373789 ~ 17373915 (+) | True | XLOC_008411 |
