RNA id: TU273447



Basic Information


Item Value
RNA id TU273447
length 298
lncRNA type inter_gene
GC content 0.26
exon number 1
gene id G240950
representative True

Chromosome Information


Item Value
chromosome id CI01000055
NCBI id null
chromosome length 6774723
location 3666306 ~ 3666603 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TGAAGGTTACACTTTATTTTAAAGTACCATAGTTACATTATAATTACTCAAATAAGTACTGAGTACTATTCTTTAAGTACATGTACTTACTATAGAGTTACAGTTAGGGTTTGGTTTAGGGTTAGTTACTTGTAATTATGCATAATTTACTGTTATTACTATAGTAAGTACATGTAGTAACGTGTAACTACGGCAATGTAAAATAAAGTGTTACCTTTATGAAATAATATAAAATGTTTGACTCTACATCATTTATTATCTAATCACATTGGGATAAAAAGGTATTTATTTACTTTAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU273446 lncRNA downstream 791 3659516 ~ 3665515 (-) True G240949
TU273365 lncRNA downstream 100464 3563813 ~ 3565842 (-) True G240884
TU273366 lncRNA downstream 171442 3494200 ~ 3494864 (-) True G240885
TU273361 lncRNA downstream 212804 3453287 ~ 3453502 (-) True G240881
TU273358 lncRNA downstream 215452 3450642 ~ 3450854 (-) True G240878
TU273453 lncRNA upstream 10632 3677235 ~ 3680938 (-) True G240954
TU273459 lncRNA upstream 19459 3686062 ~ 3686286 (-) True G240959
TU273463 lncRNA upstream 25988 3692591 ~ 3692839 (-) True G240963
TU273469 lncRNA upstream 40565 3707168 ~ 3707380 (-) True G240969
TU273528 lncRNA upstream 143947 3810550 ~ 3810782 (-) True CI01000055_03810913_03811894
CI01000055_03658872_03663877.mRNA mRNA downstream 2267 3658303 ~ 3664039 (-) True CI01000055_03658872_03663877
CI01000055_03643253_03646423.mRNA mRNA downstream 19883 3643174 ~ 3646423 (-) True CI01000055_03643253_03646423
CI01000055_03626294_03640787.mRNA mRNA downstream 25519 3626190 ~ 3640787 (-) True CI01000055_03626294_03640787
CI01000055_03616564_03618430.mRNA mRNA downstream 47876 3616555 ~ 3618430 (-) False CI01000055_03616564_03618430
CI01000055_03585354_03604468.mRNA mRNA downstream 61838 3584080 ~ 3604468 (-) True CI01000055_03585354_03604468
CI01000055_03766205_03773588.mRNA mRNA upstream 98691 3765294 ~ 3773588 (-) True CI01000055_03766205_03773588
CI01000055_03783468_03784414.mRNA mRNA upstream 116082 3782685 ~ 3784513 (-) True CI01000055_03783468_03784414
CI01000055_03808541_03810277.mRNA mRNA upstream 141690 3808293 ~ 3810490 (-) True CI01000055_03808541_03810277
CI01000055_03810913_03811894.mRNA mRNA upstream 144128 3810731 ~ 3811894 (-) False CI01000055_03810913_03811894
CI01000055_03880394_03898922.mRNA mRNA upstream 213666 3880269 ~ 3898935 (-) True CI01000055_03880394_03898922
TU273434 other downstream 46662 3616346 ~ 3619644 (-) True G240940
TU273296 other downstream 448712 3216174 ~ 3217594 (-) True G240825
TU273192 other downstream 916954 2748835 ~ 2749352 (-) True G240723
TU271063 other downstream 1347252 2311659 ~ 2319054 (-) True G238932
TU270993 other downstream 2371783 1281108 ~ 1294523 (-) True G238867
TU273475 other upstream 51048 3717651 ~ 3733995 (-) True G240975
TU273507 other upstream 244699 3926718 ~ 3936754 (-) True G241003
TU273619 other upstream 1077103 4779684 ~ 4780268 (-) True G241104
TU273990 other upstream 1667682 5334285 ~ 5352177 (-) True G241440
TU274106 other upstream 1894740 5561343 ~ 5565783 (-) True G241542

Expression Profile