Item | Value |
---|---|
RNA id | TCONS_00016852 |
length | 809 |
RNA type | mRNA |
GC content | 0.42 |
exon number | 2 |
gene id | XLOC_008417 |
representative | False |
Item | Value |
---|---|
chromosome id | NC_007126.7 |
NCBI id | CM002899.2 |
chromosome length | 48040578 |
location | 17752915 ~ 17757994 (+) |
genome version | GRCz11_2017_zebrafish_Genome |
species | zebrafish (Danio rerio) |
id | name | namespace |
---|---|---|
GO:1902600 | proton transmembrane transport | biological_process |
GO:0046034 | ATP metabolic process | biological_process |
GO:0001501 | skeletal system development | biological_process |
GO:0043062 | extracellular structure organization | biological_process |
GO:0030198 | extracellular matrix organization | biological_process |
GO:0030199 | collagen fibril organization | biological_process |
GO:0009126 | purine nucleoside monophosphate metabolic process | biological_process |
GO:0009141 | nucleoside triphosphate metabolic process | biological_process |
GO:0009144 | purine nucleoside triphosphate metabolic process | biological_process |
GO:0009161 | ribonucleoside monophosphate metabolic process | biological_process |
GO:0009167 | purine ribonucleoside monophosphate metabolic process | biological_process |
GO:0015985 | energy coupled proton transport, down electrochemical gradient | biological_process |
GO:0015986 | ATP synthesis coupled proton transport | biological_process |
GO:0009199 | ribonucleoside triphosphate metabolic process | biological_process |
GO:0009205 | purine ribonucleoside triphosphate metabolic process | biological_process |
GO:0005743 | mitochondrial inner membrane | cellular_component |
GO:0005746 | mitochondrial respirasome | cellular_component |
GO:0005753 | mitochondrial proton-transporting ATP synthase complex | cellular_component |
GO:0044421 | obsolete extracellular region part | cellular_component |
GO:0016469 | proton-transporting two-sector ATPase complex | cellular_component |
GO:0044455 | obsolete mitochondrial membrane part | cellular_component |
GO:0031012 | extracellular matrix | cellular_component |
GO:0062023 | collagen-containing extracellular matrix | cellular_component |
GO:0019866 | organelle inner membrane | cellular_component |
GO:0098643 | banded collagen fibril | cellular_component |
GO:0098644 | complex of collagen trimers | cellular_component |
GO:0005576 | extracellular region | cellular_component |
GO:0005581 | collagen trimer | cellular_component |
GO:0005583 | fibrillar collagen trimer | cellular_component |
GO:0005615 | extracellular space | cellular_component |
GO:0045259 | proton-transporting ATP synthase complex | cellular_component |
GO:0031966 | mitochondrial membrane | cellular_component |
GO:0070469 | respirasome | cellular_component |
GO:0098798 | mitochondrial protein-containing complex | cellular_component |
GO:0098800 | inner mitochondrial membrane protein complex | cellular_component |
GO:0005740 | mitochondrial envelope | cellular_component |
GO:0015002 | heme-copper terminal oxidase activity | molecular_function |
GO:0005198 | structural molecule activity | molecular_function |
GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism | molecular_function |
GO:0005201 | extracellular matrix structural constituent | molecular_function |
GO:0015077 | monovalent inorganic cation transmembrane transporter activity | molecular_function |
GO:0015078 | proton transmembrane transporter activity | molecular_function |
GO:0004129 | cytochrome-c oxidase activity | molecular_function |
GO:0050840 | extracellular matrix binding | molecular_function |
GO:0016675 | oxidoreductase activity, acting on a heme group of donors | molecular_function |
GO:0016676 | oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor | molecular_function |
id | description |
---|---|
ZDB-GENE-030131-8357 | No description available |
ensembl_id | ENSDART00000155197 |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TCONS_00016839 | lncRNA | upstream | 332494 | 17420113 ~ 17423619 (+) | True | XLOC_008413 |
TCONS_00016836 | lncRNA | upstream | 378050 | 17376367 ~ 17378063 (+) | True | XLOC_008412 |
TCONS_00016834 | lncRNA | upstream | 383185 | 17370296 ~ 17372928 (+) | True | XLOC_008410 |
TCONS_00016818 | lncRNA | upstream | 835126 | 16914731 ~ 16920987 (+) | True | XLOC_008403 |
TCONS_00016805 | lncRNA | upstream | 1710609 | 16035869 ~ 16045504 (+) | True | XLOC_008394 |
TCONS_00018766 | lncRNA | downstream | 129176 | 17886198 ~ 17923213 (+) | False | XLOC_008419 |
TCONS_00016854 | lncRNA | downstream | 130285 | 17887307 ~ 17922896 (+) | False | XLOC_008419 |
TCONS_00018767 | lncRNA | downstream | 130326 | 17887348 ~ 17923627 (+) | False | XLOC_008419 |
TCONS_00016855 | lncRNA | downstream | 144089 | 17901111 ~ 17922855 (+) | False | XLOC_008419 |
TCONS_00016856 | lncRNA | downstream | 149755 | 17906777 ~ 17936128 (+) | True | XLOC_008419 |
TCONS_00016846 | mRNA | upstream | 7794 | 17728180 ~ 17748319 (+) | False | XLOC_008416 |
TCONS_00016847 | mRNA | upstream | 8286 | 17730567 ~ 17747827 (+) | False | XLOC_008416 |
TCONS_00016845 | mRNA | upstream | 8337 | 17722054 ~ 17747776 (+) | False | XLOC_008416 |
TCONS_00016844 | mRNA | upstream | 8337 | 17722054 ~ 17747776 (+) | False | XLOC_008416 |
TCONS_00016848 | mRNA | upstream | 8337 | 17743136 ~ 17747776 (+) | True | XLOC_008416 |
TCONS_00016853 | mRNA | downstream | 91568 | 17848590 ~ 17856878 (+) | True | XLOC_008418 |
TCONS_00016858 | mRNA | downstream | 373087 | 18130109 ~ 18155991 (+) | False | XLOC_008421 |
TCONS_00016862 | mRNA | downstream | 1106853 | 18863875 ~ 18988585 (+) | True | XLOC_008424 |
TCONS_00016865 | mRNA | downstream | 1536722 | 19293744 ~ 19320615 (+) | False | XLOC_008429 |
TCONS_00016866 | mRNA | downstream | 1536821 | 19293843 ~ 19317300 (+) | False | XLOC_008429 |
TCONS_00016838 | other | upstream | 339506 | 17406970 ~ 17416607 (+) | False | XLOC_008413 |
TCONS_00016835 | other | upstream | 382198 | 17373789 ~ 17373915 (+) | True | XLOC_008411 |
TCONS_00016824 | other | upstream | 654445 | 17100477 ~ 17101668 (+) | False | XLOC_008406 |
TCONS_00016813 | other | upstream | 926237 | 16829762 ~ 16829876 (+) | True | XLOC_008400 |
TCONS_00016809 | other | upstream | 1237030 | 16518967 ~ 16519083 (+) | True | XLOC_008398 |
TCONS_00016857 | other | downstream | 329680 | 18086702 ~ 18086816 (+) | True | XLOC_008420 |
TCONS_00016870 | other | downstream | 1567705 | 19324727 ~ 19329943 (+) | False | XLOC_008430 |
TCONS_00016873 | other | downstream | 1578645 | 19335667 ~ 19340004 (+) | True | XLOC_008431 |
TCONS_00016899 | other | downstream | 2233101 | 19990123 ~ 19998775 (+) | False | XLOC_008443 |
TCONS_00016911 | other | downstream | 2598773 | 20355795 ~ 20361972 (+) | True | XLOC_008446 |