RNA id: TU283764


Basic Information

Item Value
RNA id TU283764
length 245
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G250035
representative True

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 4541999 ~ 4542243 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTTGGGCTTGGCCTCTTAGTTCCAGGGAAAGGAACTCTTAATGCTTCAGCATACCAAGACATTTTGGACAATTTCATGCTCCCAACTTTGTGGGAACAGTTTGGGGATGGCCCCTTCCTGTTCCAACATGACTGCGCACCAGTGCACAAAGCAAGGTCCATAAAGACATGGATGAGTGAGTTTGGTGTGGAGGAACTTGACTGGCCTGCACAGAGTCCTGACCTCAACCCGACAAAACATCTTTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU283723 lncRNA upstream 89428 4451527 ~ 4452571 (+) True G250013
TU283680 lncRNA upstream 121207 4420348 ~ 4420792 (+) True G249979
TU283681 lncRNA upstream 123735 4417925 ~ 4418264 (+) True G249980
TU283682 lncRNA upstream 128362 4363707 ~ 4413637 (+) True G249981
TU283668 lncRNA upstream 201015 4340772 ~ 4340984 (+) True G249970
TU283786 lncRNA downstream 134670 4676913 ~ 4677151 (+) True G250049
TU283776 lncRNA downstream 144392 4686635 ~ 4689520 (+) True CI01000058_04678629_04687645
TU283812 lncRNA downstream 185566 4727809 ~ 4738445 (+) True G250075
TU283841 lncRNA downstream 341762 4884005 ~ 4884279 (+) True G250098
TU283838 lncRNA downstream 342219 4884462 ~ 4885100 (+) True G250095
CI01000058_04466648_04523385.mRNA mRNA upstream 18516 4466196 ~ 4523483 (+) True CI01000058_04466648_04523385
CI01000058_04405407_04408449.mRNA mRNA upstream 132604 4405407 ~ 4409395 (+) True CI01000058_04405407_04408449
CI01000058_04360496_04365634.mRNA mRNA upstream 175881 4360496 ~ 4366118 (+) True CI01000058_04360496_04365634
CI01000058_04344622_04358133.mRNA mRNA upstream 183866 4343021 ~ 4358133 (+) True CI01000058_04344622_04358133
CI01000058_04303891_04308850.mRNA mRNA upstream 233002 4303804 ~ 4308997 (+) True CI01000058_04303891_04308850
CI01000058_04556260_04565696.mRNA mRNA downstream 13914 4556157 ~ 4566008 (+) True CI01000058_04556260_04565696
CI01000058_04584028_04613429.mRNA mRNA downstream 41785 4584028 ~ 4613747 (+) True CI01000058_04584028_04613429
CI01000058_04637318_04650366.mRNA mRNA downstream 94975 4637218 ~ 4650506 (+) True CI01000058_04637318_04650366
CI01000058_04656762_04675421.mRNA mRNA downstream 114073 4656316 ~ 4676097 (+) True CI01000058_04656762_04675421
CI01000058_04678629_04687645.mRNA mRNA downstream 135859 4678102 ~ 4688495 (+) False CI01000058_04678629_04687645
TU281441 other upstream 2744267 1795713 ~ 1795757 (+) True G247958
TU281423 other upstream 3085552 1452997 ~ 1456447 (+) True G247940
TU281473 other upstream 3253729 1228609 ~ 1228623 (+) True G247990
TU280966 other upstream 3944828 592331 ~ 597171 (+) True CI01000058_00592498_00596709
TU280659 other upstream 4086255 435042 ~ 455744 (+) True CI01000058_00435196_00437830
TU283772 other downstream 152165 4694408 ~ 4696910 (+) False G250039
TU283769 other downstream 152219 4694462 ~ 4696910 (+) False G250039
TU283770 other downstream 152219 4694462 ~ 4697161 (+) False G250039
TU283771 other downstream 152219 4694462 ~ 4697032 (+) True G250039
TU283837 other downstream 284133 4826376 ~ 4849531 (+) True G250094

Expression Profile