RNA id: TU283965


Basic Information

Item Value
RNA id TU283965
length 205
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G250219
representative True

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 5180901 ~ 5181105 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AACACTTTCAAATTTAAATACAAAACGCGTCTGTGGAAAATGTGACTGCAGCATAAATGTTTGAATAAGCCCTGCTTATCAGTGCGGTATGAGAAGCAAAAAGCTTTGTTCGGTGGGCTGAGAAGAATCCTCGTCCTTTATTAAACATCTAAGTTCAGGTCAGCTTCATTACCATAATACAGAGCTCTTATACCATGAAACAAAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU283931 lncRNA upstream 43049 5084640 ~ 5137852 (+) True G250187
TU283867 lncRNA upstream 262328 4918372 ~ 4918573 (+) True G250124
TU283863 lncRNA upstream 275761 4904940 ~ 4905140 (+) True G250120
TU283838 lncRNA upstream 295801 4884462 ~ 4885100 (+) True G250095
TU283841 lncRNA upstream 296622 4884005 ~ 4884279 (+) True G250098
CI01000058_05091135_05091372.mRNA mRNA upstream 88886 5091135 ~ 5092015 (+) True CI01000058_05091135_05091372
CI01000058_04923557_04926609.mRNA mRNA upstream 253247 4923290 ~ 4927654 (+) True CI01000058_04923557_04926609
CI01000058_04864571_04888198.mRNA mRNA upstream 292685 4864571 ~ 4888216 (+) False CI01000058_04864571_04888198
CI01000058_04806751_04821030.mRNA mRNA upstream 359206 4806751 ~ 4821695 (+) True CI01000058_04806751_04821030
CI01000058_04792565_04803181.mRNA mRNA upstream 377497 4792565 ~ 4803404 (+) True CI01000058_04792565_04803181
TU283837 other upstream 297064 4826376 ~ 4849531 (+) True G250094
TU283770 other upstream 483740 4694462 ~ 4697161 (+) False G250039
TU283771 other upstream 483869 4694462 ~ 4697032 (+) True G250039
TU283772 other upstream 483991 4694408 ~ 4696910 (+) False G250039

Expression Profile