RNA id: CI01000059_00378673_00379901.mRNA


Basic Information

Item Value
RNA id CI01000059_00378673_00379901.mRNA
length 289
RNA type mRNA
GC content 0.45
exon number 2
gene id CI01000059_00378673_00379901
representative False

Chromosome Information

Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 378587 ~ 380137 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AGAAACAGTTTAAATCAGAAGGTACAACTAACTAACTGACTTCACTGCATGAAACGTTTTTAGTGATAAAACGAGTGTAGACAGGCCTTTTCTTGTAGTTAGCGAGCTAACCTGCTAATCAGAATGACCCAACAAGGAGCTGCCCTGCAAACCTACAACAACGAGCTTGTCAAATGTATAGAGGAGCTGTGCTCTAAAAGAGAAGACCTGAACCGGCTGATCCAGCAGGAGGAAGCAGAGAAAACTCGCCTGCAGCATGACATCCGTGTGCTGACAGAGAAGCTGAGTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU285347 lncRNA downstream 47377 330999 ~ 331296 (-) True G251375
TU285278 lncRNA downstream 72204 301527 ~ 306469 (-) True G251315
TU285296 lncRNA downstream 89620 288437 ~ 289053 (-) True G251332
TU285298 lncRNA downstream 91924 284279 ~ 286749 (-) True G251334
TU285343 lncRNA downstream 110567 267701 ~ 268106 (-) True G251373
TU285396 lncRNA upstream 25701 405725 ~ 410613 (-) True G251420
TU285398 lncRNA upstream 26155 406179 ~ 411625 (-) True G251421
TU285383 lncRNA upstream 52887 432911 ~ 433470 (-) True G251407
TU285449 lncRNA upstream 165431 545455 ~ 545706 (-) True G251469
TU285458 lncRNA upstream 179603 559627 ~ 559991 (-) True G251478
CI01000059_00326063_00336542.mRNA mRNA downstream 42131 326037 ~ 336542 (-) True CI01000059_00326063_00336542
CI01000059_00311235_00321078.mRNA mRNA downstream 57595 311046 ~ 321078 (-) True CI01000059_00311235_00321078
CI01000059_00274535_00278600.mRNA mRNA downstream 100073 274387 ~ 278600 (-) True CI01000059_00274535_00278600
CI01000059_00213992_00224796.mRNA mRNA downstream 153877 212582 ~ 224796 (-) True CI01000059_00213992_00224796
CI01000059_00196450_00199898.mRNA mRNA downstream 178775 196265 ~ 199898 (-) True CI01000059_00196450_00199898
CI01000059_00456370_00458895.mRNA mRNA upstream 76260 456284 ~ 459440 (-) True CI01000059_00456370_00458895
CI01000059_00476366_00482307.mRNA mRNA upstream 95970 475994 ~ 482307 (-) True CI01000059_00476366_00482307
CI01000059_00513674_00528840.mRNA mRNA upstream 133445 513469 ~ 529949 (-) True CI01000059_00513674_00528840
CI01000059_00570850_00600462.mRNA mRNA upstream 190826 570850 ~ 600858 (-) True CI01000059_00570850_00600462
CI01000059_00697568_00720771.mRNA mRNA upstream 317544 697568 ~ 720771 (-) True CI01000059_00697568_00720771
TU285506 other upstream 871692 1255599 ~ 1255662 (-) True G251512
TU286339 other upstream 1716673 2099629 ~ 2099667 (-) True G252257
TU287202 other upstream 3091451 3471475 ~ 3471909 (-) True G253013
TU288177 other upstream 4373514 4753538 ~ 4754082 (-) True G253914
TU288508 other upstream 4857762 5237786 ~ 5238299 (-) True G254203

Expression Profile