RNA id: CI01000059_00570850_00600462.mRNA


Basic Information

Item Value
RNA id CI01000059_00570850_00600462.mRNA
length 2849
RNA type mRNA
GC content 0.48
exon number 18
gene id CI01000059_00570850_00600462
representative True

Chromosome Information

Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 570850 ~ 600858 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ATTTTATCAAATAATTTGTAACAAGGGTATATTTACTAGTGTTTTCCCCATGGAAGTTGAGTTGAAGTGCTTTTTGTGTGGCTTGTGTAAAATGGCTTATTTTCTGTGTTGCAGGTTCGAGTTACTCTGTAAGATCCACTGGAAGAGGCCTCACACAGATGGGAAGAGTCTGTATGAAGCACCTTGAAGGTGCACCCAATCATTGGACTATTAGTTTCACATAATCCACTTTTCCTGACAGAATATCCAGTGTGGATGACAATGATAACAAAGGCTTAAAGTCTTTGGATAAAACCTTTTTTTTTCTTTGACTCTTGCTCTCATACAATTATTGGTTCAAAGAACCTTTGTGAGCGGTCATTATCATTTTTGTGATACCAGAACTTTACCATAAAAATGAGCGCAGAAGGATATCAGTACAGAGCTCTTTATGACTATAAGAAAGAAAGGGAGGAGGATATTGACCTGCATGTAGGGGACATTCTTACAGTCAATAAGGGTGCACTACTTTCAGTTGGCTACGTAGAGGGCATGGAGGAGAGACCAGATGAAATCGGATGGCTTCCTGGCTTTAATGAAACCACTCAAGAAAAGGGGGACTTTCCTGGTACGTATGTGGAGTTCATCGGCAAGAAAAAGATTTCTCCACCAACTCCCAAACCAAGGCCCCCAAGGCCTCTACCTGTGGCTCCGGGGCCCGCAAGGCCAGACTCGGACTCTGAGCAAAGCTTAAGCACTCTGTTAGACCTGACAGAGCAGTTCGCTCCACCAGAGATGGCACCGCCCATGCTGCTCAAGCTCCTTGAGGCCATCGAGAGGAAAGGTCTAGACAACCCTACTCTCTACAGAAACTTCACTGCTGGCGGAGGGCTGGATGTCAGACAATGCTTTGATAGTGACCCTGCCTCAGTGGATCTTGAGCAGATGGACCTTCAGATGTTGTGTGATGGTCTGAGGAGGTATCTTCAAGATCTGCCTCAGCCTGTCATCCCTTCTATGATCTACACTGAGATGATGCGCATCGCTCAAGAAGTGCAGGGTACAGACGAATGCGCACATCACCTGCGGCTGGTGGCCAGCTCCTCTGCACTTCCTCCACAGTACTGGCTAACCCTCCAGAGCTTGCTGCGCCACTTCTCCCGTGTATGCCAGGCCTCAGCGGCTAACCTGCTCAGTGCTCGTGCCCTCGCTGAGATCTTCAGTCCAACACTCTTTAGACATCAGCCCACCAGCTGTGAGCCCAGCCCAGAGGCACACATCAGGATAGTTGAAATCTTGGTGACCAGCGAATGGAGTGACAGTCAGGCAGCTCCAGGGACTGCCTACGTGCCGCTGCAGCAGCGATTTTGTCTGCCTACCAGGAGACAGGCCGTGCTGATCGCTAATGCTCAGAAAATAGAGGCAGGTGATGAGGCAGGAGTGGCCAGCAACAGTCCTGCAGCACCATTGGCTGGGATATGCAATACACCAGTAGGCATGGCGGATTTAGAGAGTCTAAGACTTGACACTGGATCAGGATCTGGATCAGACCTGCTGTTTTATATAGAAATAGACCCGCCAGCACTACCTCCCAAGCCACCCAAACCAACGTCTGTCACTAACAACGGTATGAACAACAACATGGCTCTGCAAGACGCTGAATGGTACTGGGGGGACATCTCTAGGCAAGTACTCATCAAACCTAGTATTTGGGAGGAGGTCAACGAAAAGCTTAGGGACACTGCTGATGGTACGTTTTTGGTCCGAGATGCCTCCACTAAAATGCATGGGGATTACACACTCACACTGAGGAAGGGAGGTAACAACAAGCTAATCAAAATCTTCCACCGTGATGGGAAGTACGGCTTCTCAGACCCCCTGACTTTCAACTCTGTGGTTGAGTTGATCAACCACTATCGGCACGAGTCTCTTGCCCAGTACAACCCCAAACTAGATGTGAAACTACTGTATCCTGTGTCTAAGCACCAACAGGATCAAGTGGTAAAGGAGGACAACATTGAAGCTGTTGGGAAAAAGTTGCACGAATACCACCAGCAGTACCAAGAAAAGAACAGAGAGTATGATCGACTCTACGAGGAATACACTAGAACATCACAGGAAATACAAATGAAAAGGACTGCTATTGAAGCTTTTAATGAGACCATAAAAATATTTGAAGAGCAGTGCCAGACGCAAGAACGATACAGCAAAGAATATATCGAGAAGTTTAGAAGAGAAGGCAATGAGAAGGAAATCCAAAGGATCATGGTCAACTATGAGAAGTTAAAATCGCGCATCAGTGAAATTGTGGACAGCAAACGACGTCTCGAGGAAGATCTGAAGAAGCAAGCGGCAGACTACAGAGAGATCGACAAGCGGATGAACAGCATTAAGCCTGACCTCATCCAGCTCAGAAAGACCAGGGATCAGTACCTCATGTGGTTGACACAGAAAGGGGTCAGACAGAAGAAACTCAACGAATGGTTGGGAATCAAAAACGAAAACCAGGACGATCAGTACTCAATGGTGGAAGACGATGAGGATTTGCCACACCATGACGAACGCTCCTGGAAGCTGGGTAACATTAACCGCAACCAGGCCGAGGCCCTTTTGCGGGGCAAGAGAGATGGAACATTCCTGGTCAGGGACAGCAGCAAAGCTGGATGTTACGCCTGCAGTGTTGTTGTTGATGGTGAGGTCAAGCACTGCGTCATCAACAAGACACCCACAGGATATGGCTTTGCTGAGCCCTACAACCTTTACAGCTCTCTCAAAGAACTGGTCTTGCACTACCAGCACACATCCTTGGTTCAGCACAATGACTCTTTGAATGTCACGTTAGCATACCCAGTCTACGCACACCAGAGGCG

Function

GO:

id name namespace
GO:0001678 cellular glucose homeostasis biological_process

KEGG:

id description
K02649 PIK3R1_2_3; phosphoinositide-3-kinase regulatory subunit alpha/beta/delta

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU285458 lncRNA downstream 10859 559627 ~ 559991 (-) True G251478
TU285449 lncRNA downstream 25144 545455 ~ 545706 (-) True G251469
TU285383 lncRNA downstream 137380 432911 ~ 433470 (-) True G251407
TU285398 lncRNA downstream 159225 406179 ~ 411625 (-) True G251421
TU285396 lncRNA downstream 160237 405725 ~ 410613 (-) True G251420
TU285464 lncRNA upstream 11305 612163 ~ 612566 (-) True G251484
TU285512 lncRNA upstream 29120 629978 ~ 630230 (-) True G251518
TU285526 lncRNA upstream 55774 656632 ~ 656864 (-) True G251528
TU285527 lncRNA upstream 59155 660013 ~ 660240 (-) True G251529
TU285532 lncRNA upstream 68365 669223 ~ 670067 (-) True G251534
CI01000059_00513674_00528840.mRNA mRNA downstream 40901 513469 ~ 529949 (-) True CI01000059_00513674_00528840
CI01000059_00476366_00482307.mRNA mRNA downstream 88543 475994 ~ 482307 (-) True CI01000059_00476366_00482307
CI01000059_00456370_00458895.mRNA mRNA downstream 111410 456284 ~ 459440 (-) True CI01000059_00456370_00458895
CI01000059_00378673_00379901.mRNA mRNA downstream 190826 378673 ~ 380024 (-) False CI01000059_00378673_00379901
CI01000059_00326063_00336542.mRNA mRNA downstream 234308 326037 ~ 336542 (-) True CI01000059_00326063_00336542
CI01000059_00697568_00720771.mRNA mRNA upstream 96710 697568 ~ 720771 (-) True CI01000059_00697568_00720771
CI01000059_00767393_00826328.mRNA mRNA upstream 164875 765733 ~ 826581 (-) True CI01000059_00767393_00826328
CI01000059_00853242_00855219.mRNA mRNA upstream 251896 852754 ~ 855284 (-) True CI01000059_00853242_00855219
CI01000059_00867492_00873239.mRNA mRNA upstream 265807 866665 ~ 873239 (-) True CI01000059_00867492_00873239
CI01000059_00991306_01000173.mRNA mRNA upstream 390173 991031 ~ 1000173 (-) True CI01000059_00991306_01000173
TU285270 other downstream 190713 369931 ~ 373400 (-) True G251313
TU285506 other upstream 650858 1255599 ~ 1255662 (-) True G251512
TU286339 other upstream 1495839 2099629 ~ 2099667 (-) True G252257
TU287202 other upstream 2870617 3471475 ~ 3471909 (-) True G253013
TU288177 other upstream 4152680 4753538 ~ 4754082 (-) True G253914
TU288508 other upstream 4636928 5237786 ~ 5238299 (-) True G254203

Expression Profile


Homologous

species RNA id representative length rna type GC content exon number chromosome id location
zebrafish (Danio rerio) TCONS_00061040 False 1435 mRNA 0.46 10 NC_007116.7 54769489 ~ 54772982 (-)