RNA id: CI01000059_07212957_07217869.mRNA


Basic Information

Item Value
RNA id CI01000059_07212957_07217869.mRNA
length 698
RNA type mRNA
GC content 0.54
exon number 4
gene id CI01000059_07212957_07217869
representative True

Chromosome Information

Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 7212957 ~ 7217869 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ATTTAGAGGCAGAGACAGAAGATGAACTCAACATATTGATGATGGATGAAACACTGACAGCACTTACAACACTTATAATGACAGTCATTAGATGGCAGGTCCATGGATTTTTTAAGGGCATGTCATTTCCTGTCCTCTCTGTTGCCCTTAGCAACGCGGTGGTCTTTGGTTCCTACAGTAATGCCCTGGATTACCTTGACCCGTCTCACCGCAGCAGCTCTGACCACAGCGAGCGCTCGCCACTCACAGCTGTCTTCACGGCTGGGTGCTTCTCTGCTCCGATAGACCTGGTCAAAGTGCGTCTGCAGAGCCAGACGACGGGTTATAAATACAGAGGCCCCACACATTGTGTAGCTGTGATCTTAAGAGAGGACGGGGTCAGAGGGCTGTTCAGAGGAATGGGAGCTCTTGCCCTACGAGACGTGCCGTGTTATGGACTTTACTTCCTGCCGTACGAGTTCACCTGCAGGATGCTGACTGAGAAAGGGAAGCAGCCAGGTAACAATGCTGTGCTAGTGGCCGGTGGCGTTGCTGGTGTGGTCACATGGGCCTGCGCCACACCTATGGACGTGGTCAAGGCTCGACTGCAGATGTCTGGAGGCGGCGGGCGGGTGTACAGCGGTCTGCTGCACTGCATTACTGTGAGTGTGCGTGAAGAGGGCGTGAGAGTGTTCTTCAAAGGCCTCCTTCTGAACAGC

Function

GO: NA

KEGG:

id description
K15123 SLC25A45_47; solute carrier family 25, member 45/47

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU290271 lncRNA downstream 44104 7167506 ~ 7168853 (-) True G255735
TU290225 lncRNA downstream 166356 6932138 ~ 7046601 (-) True G255691
TU290255 lncRNA downstream 309490 6901490 ~ 6903467 (-) True G255719
TU289686 lncRNA downstream 401932 6810802 ~ 6811025 (-) True G255238
TU289588 lncRNA downstream 411352 6797770 ~ 6801605 (-) True G255158
TU290276 lncRNA upstream 13919 7231788 ~ 7231999 (-) True G255740
TU290278 lncRNA upstream 16246 7234115 ~ 7234338 (-) True G255742
TU290231 lncRNA upstream 56553 7274422 ~ 7327314 (-) True G255697
TU290215 lncRNA upstream 103650 7321519 ~ 7325568 (-) True G255681
TU290386 lncRNA upstream 454179 7672048 ~ 7672829 (-) True G255840
CI01000059_07156085_07160233.mRNA mRNA downstream 52724 7155716 ~ 7160233 (-) True CI01000059_07156085_07160233
CI01000059_07144283_07150061.mRNA mRNA downstream 60256 7143846 ~ 7152701 (-) True CI01000059_07144283_07150061
CI01000059_07002729_07060398.mRNA mRNA downstream 152559 7002677 ~ 7060398 (-) True CI01000059_07002729_07060398
CI01000059_06914640_06936857.mRNA mRNA downstream 276100 6913862 ~ 6936857 (-) True CI01000059_06914640_06936857
CI01000059_06817935_06848280.mRNA mRNA downstream 364677 6817890 ~ 6848280 (-) True CI01000059_06817935_06848280
CI01000059_07222636_07225677.mRNA mRNA upstream 4584 7222453 ~ 7225677 (-) True CI01000059_07222636_07225677
CI01000059_07226610_07230853.mRNA mRNA upstream 8741 7226610 ~ 7230853 (-) True CI01000059_07226610_07230853
CI01000059_07379550_07383609.mRNA mRNA upstream 161057 7378926 ~ 7383674 (-) True CI01000059_07379550_07383609
CI01000059_07399949_07406822.mRNA mRNA upstream 182061 7399930 ~ 7406992 (-) True CI01000059_07399949_07406822
CI01000059_07418303_07423995.mRNA mRNA upstream 200223 7418092 ~ 7424051 (-) True CI01000059_07418303_07423995
TU289512 other downstream 970165 6236106 ~ 6242792 (-) True G255092
TU288508 other downstream 1974658 5237786 ~ 5238299 (-) True G254203
TU288177 other downstream 2458875 4753538 ~ 4754082 (-) True G253914
TU287202 other downstream 3741048 3471475 ~ 3471909 (-) True G253013
TU286339 other downstream 5113290 2099629 ~ 2099667 (-) True G252257
TU291574 other upstream 1763827 8981696 ~ 8982117 (-) False G256890
TU291575 other upstream 1763827 8981696 ~ 8982117 (-) True G256890
TU291707 other upstream 2236347 9454216 ~ 9599008 (-) True G257014

Expression Profile