RNA id: CI01000059_08251075_08251545.mRNA


Basic Information

Item Value
RNA id CI01000059_08251075_08251545.mRNA
length 439
RNA type mRNA
GC content 0.39
exon number 2
gene id CI01000059_08251075_08251545
representative True

Chromosome Information

Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 8250954 ~ 8251545 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CTTCTGATGGATTTCAGTGGGAAATATCAGCTGGAGTCACATGAGAACTTTGAGGCTTTCATGAAGGCCATTGGGCTGCCGGAGGATGAGATCGAGAAAGGCAAAGACATCAAGAGCATCTCAGAGATCCAGCAGGACGGAAATGACTTCAAGGTGACGGTGACGGCGGGAACTAAAGTGATCCTGTACTCGTTCACTGTGGGTGAGGAGTGTGAGCTGGAGACCTTCACTGGAGAAAAAGCTAAAGTTAGTCAGATCACAGTCTATTCATGTTCCCACCAACATCGAAAGAATATTTTTGAAATAAAATATGAGTAGATTGATTGGAGTGAAATATGAGTATTAATTAATTGAGTAGATAAATTAATATTTTTGGAGTGAAATATGAGTAGATTGATTAATCTAGTAGGTTGATTAATCTTTTTTGGAGTCAAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU291287 lncRNA downstream 163 8249522 ~ 8250791 (-) True G256636
TU291284 lncRNA downstream 16446 8234221 ~ 8234508 (-) True G256633
TU291217 lncRNA downstream 67943 8181656 ~ 8183011 (-) True G256571
TU291231 lncRNA downstream 86422 8128451 ~ 8164532 (-) True G256584
TU290561 lncRNA downstream 135474 8115278 ~ 8115480 (-) True G255994
TU291298 lncRNA upstream 9920 8261465 ~ 8261681 (-) True G256643
TU291279 lncRNA upstream 30565 8282110 ~ 8283205 (-) True G256628
TU291277 lncRNA upstream 72124 8323669 ~ 8324719 (-) True G256626
TU291327 lncRNA upstream 230979 8482524 ~ 8482767 (-) True G256669
TU291331 lncRNA upstream 231900 8522131 ~ 8522285 (-) True G256670
CI01000059_08221332_08227552.mRNA mRNA downstream 23402 8221270 ~ 8227552 (-) True CI01000059_08221332_08227552
CI01000059_08188428_08219512.mRNA mRNA downstream 31442 8188054 ~ 8219512 (-) True CI01000059_08188428_08219512
CI01000059_08107732_08108249.mRNA mRNA downstream 142397 8107448 ~ 8108557 (-) True CI01000059_08107732_08108249
CI01000059_08031635_08038209.mRNA mRNA downstream 212745 8030188 ~ 8038209 (-) True CI01000059_08031635_08038209
CI01000059_07977090_07983037.mRNA mRNA downstream 267917 7976964 ~ 7983037 (-) True CI01000059_07977090_07983037
CI01000059_08263161_08266360.mRNA mRNA upstream 11452 8262997 ~ 8266360 (-) True CI01000059_08263161_08266360
CI01000059_08286190_08290114.mRNA mRNA upstream 34555 8286100 ~ 8290114 (-) True CI01000059_08286190_08290114
CI01000059_08334902_08338268.mRNA mRNA upstream 83198 8334743 ~ 8338268 (-) True CI01000059_08334902_08338268
CI01000059_08354408_08356482.mRNA mRNA upstream 101063 8352608 ~ 8356552 (-) True CI01000059_08354408_08356482
CI01000059_08360308_08360726.mRNA mRNA upstream 108220 8359765 ~ 8360807 (-) True CI01000059_08360308_08360726
TU289512 other downstream 2008162 6236106 ~ 6242792 (-) True G255092
TU288508 other downstream 3012655 5237786 ~ 5238299 (-) True G254203
TU288177 other downstream 3496872 4753538 ~ 4754082 (-) True G253914
TU287202 other downstream 4779045 3471475 ~ 3471909 (-) True G253013
TU286339 other downstream 6151287 2099629 ~ 2099667 (-) True G252257
TU291574 other upstream 730151 8981696 ~ 8982117 (-) False G256890
TU291575 other upstream 730151 8981696 ~ 8982117 (-) True G256890
TU291707 other upstream 1202671 9454216 ~ 9599008 (-) True G257014

Expression Profile