RNA id: TU285342


Basic Information

Item Value
RNA id TU285342
length 245
lncRNA type antisense_over
GC content 0.54
exon number 1
gene id G251373
representative False

Chromosome Information

Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 267701 ~ 268106 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TTCTTCATTCACTCACCACAAGCATGGCATCCGTTGAGTTTGTGAGTGAGTGCACCAGGCTGGTGCGTGTGCGTGCGAGTTTCTCCAGAGTGTGAGTCCAGTGTGCTCTCTGAGTGAGGAGGCACTGTTCCACTCGCTCTTCTTCTCTCTGTATGGCCTCTAGGAGACGCTGCTCCTCCTCCTCAAGAGCCTCACGCACCACTTTCACCTGAGCCAACACTCGTTCTCTTGCACTGTTTGCATCT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU285338 lncRNA downstream 1098 266102 ~ 266603 (-) True G251372
TU285337 lncRNA downstream 2633 264852 ~ 265068 (-) True G251371
TU285331 lncRNA downstream 12697 250980 ~ 255004 (-) True G251365
TU285328 lncRNA downstream 23042 244442 ~ 244659 (-) True G251362
TU285326 lncRNA downstream 24024 243332 ~ 243677 (-) True G251360
TU285298 lncRNA upstream 16334 284279 ~ 286749 (-) True G251334
TU285296 lncRNA upstream 20492 288437 ~ 289053 (-) True G251332
TU285278 lncRNA upstream 33582 301527 ~ 306469 (-) True G251315
TU285347 lncRNA upstream 63054 330999 ~ 331296 (-) True G251375
TU285396 lncRNA upstream 137780 405725 ~ 410613 (-) True G251420
CI01000059_00213992_00224796.mRNA mRNA downstream 42905 212582 ~ 224796 (-) True CI01000059_00213992_00224796
CI01000059_00196450_00199898.mRNA mRNA downstream 67803 196265 ~ 199898 (-) True CI01000059_00196450_00199898
CI01000059_00190249_00194415.mRNA mRNA downstream 73237 190110 ~ 194464 (-) True CI01000059_00190249_00194415
CI01000059_00185897_00188899.mRNA mRNA downstream 78657 185837 ~ 189044 (-) True CI01000059_00185897_00188899
CI01000059_00144949_00157845.mRNA mRNA downstream 109816 144333 ~ 157885 (-) True CI01000059_00144949_00157845
CI01000059_00274535_00278600.mRNA mRNA upstream 6442 274387 ~ 278600 (-) True CI01000059_00274535_00278600
CI01000059_00311235_00321078.mRNA mRNA upstream 43101 311046 ~ 321078 (-) True CI01000059_00311235_00321078
CI01000059_00326063_00336542.mRNA mRNA upstream 58092 326037 ~ 336542 (-) True CI01000059_00326063_00336542
CI01000059_00378673_00379901.mRNA mRNA upstream 110728 378673 ~ 380024 (-) False CI01000059_00378673_00379901
CI01000059_00456370_00458895.mRNA mRNA upstream 188339 456284 ~ 459440 (-) True CI01000059_00456370_00458895
TU285270 other upstream 101986 369931 ~ 373400 (-) True G251313
TU285269 other upstream 105033 372978 ~ 373400 (-) True G251313
TU285506 other upstream 983771 1255599 ~ 1255662 (-) True G251512
TU286339 other upstream 1828752 2099629 ~ 2099667 (-) True G252257
TU287202 other upstream 3203530 3471475 ~ 3471909 (-) True G253013

Expression Profile