RNA id: TU285512



Basic Information


Item Value
RNA id TU285512
length 253
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G251518
representative True

Chromosome Information


Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 629978 ~ 630230 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ATCAGACACGCTCATCACAACCTCCGACTTCATTCTCCAGGTCAAAAAGGAAATGTAGCCTATGTAATGTTTGAGCTGTCTTAACTGAAAGCAACTTGCACTGACATATCTTAAAATATGTCAGTGCCATTGTTTTGACTCAAGATGCACATTTTTTTTTTTTTTTTTTTTTTAAGGCACGTTTATAAAAGCTACTTAAATGTCCTAATTTAATTGTGGCCTACTCCTGGCTTAACCACAGCCTTGTCTGTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU285464 lncRNA downstream 17412 612163 ~ 612566 (-) True G251484
TU285369 lncRNA downstream 35853 586930 ~ 594125 (-) True G251393
TU285458 lncRNA downstream 69987 559627 ~ 559991 (-) True G251478
TU285449 lncRNA downstream 84272 545455 ~ 545706 (-) True G251469
TU285383 lncRNA downstream 196508 432911 ~ 433470 (-) True G251407
TU285526 lncRNA upstream 26402 656632 ~ 656864 (-) True G251528
TU285527 lncRNA upstream 29783 660013 ~ 660240 (-) True G251529
TU285532 lncRNA upstream 38993 669223 ~ 670067 (-) True G251534
TU285535 lncRNA upstream 43978 674208 ~ 674444 (-) True G251537
TU285538 lncRNA upstream 47285 677515 ~ 677758 (-) True G251540
CI01000059_00570850_00600462.mRNA mRNA downstream 29120 570850 ~ 600858 (-) True CI01000059_00570850_00600462
CI01000059_00513674_00528840.mRNA mRNA downstream 100029 513469 ~ 529949 (-) True CI01000059_00513674_00528840
CI01000059_00476366_00482307.mRNA mRNA downstream 147671 475994 ~ 482307 (-) True CI01000059_00476366_00482307
CI01000059_00456370_00458895.mRNA mRNA downstream 170538 456284 ~ 459440 (-) True CI01000059_00456370_00458895
CI01000059_00378673_00379901.mRNA mRNA downstream 249954 378673 ~ 380024 (-) False CI01000059_00378673_00379901
CI01000059_00697568_00720771.mRNA mRNA upstream 67338 697568 ~ 720771 (-) True CI01000059_00697568_00720771
CI01000059_00767393_00826328.mRNA mRNA upstream 135503 765733 ~ 826581 (-) True CI01000059_00767393_00826328
CI01000059_00853242_00855219.mRNA mRNA upstream 222524 852754 ~ 855284 (-) True CI01000059_00853242_00855219
CI01000059_00867492_00873239.mRNA mRNA upstream 236435 866665 ~ 873239 (-) True CI01000059_00867492_00873239
CI01000059_00991306_01000173.mRNA mRNA upstream 360801 991031 ~ 1000173 (-) True CI01000059_00991306_01000173
TU285270 other downstream 249841 369931 ~ 373400 (-) True G251313
TU285506 other upstream 621486 1255599 ~ 1255662 (-) True G251512
TU286339 other upstream 1466467 2099629 ~ 2099667 (-) True G252257
TU287202 other upstream 2841245 3471475 ~ 3471909 (-) True G253013
TU288177 other upstream 4123308 4753538 ~ 4754082 (-) True G253914
TU288508 other upstream 4607556 5237786 ~ 5238299 (-) True G254203

Expression Profile