RNA id: TU285585



Basic Information


Item Value
RNA id TU285585
length 219
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G251583
representative True

Chromosome Information


Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 939642 ~ 939860 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CCGCTAATTCGATCCAGGTTTACCTAGTCAAGATAATTGCGCGTGCACGCTTTTCTTAAGCAGCCCTAGAGGTCGATCATGGATCAAATCGATCCACCATAGGAAACAGCATACATTTTGTGCTATTTTATGCGTTTGAGACATGGTGTTTTCCTCAGTGCATAACTTACTTTTCACAAGTTTATTCTCCATCTGTAAATGTTAGAAAGTCATGCAAAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU285505 lncRNA downstream 1847 933490 ~ 937795 (-) True G251511
TU285571 lncRNA downstream 52766 886667 ~ 886876 (-) True G251569
TU285547 lncRNA downstream 256625 682740 ~ 683017 (-) True G251549
TU285538 lncRNA downstream 261884 677515 ~ 677758 (-) True G251540
TU285535 lncRNA downstream 265198 674208 ~ 674444 (-) True G251537
TU285588 lncRNA upstream 12284 952144 ~ 952360 (-) True G251586
TU285589 lncRNA upstream 15544 955404 ~ 955643 (-) True G251587
TU285591 lncRNA upstream 19364 959224 ~ 959437 (-) True G251589
TU285595 lncRNA upstream 33693 973553 ~ 973909 (-) True G251593
TU285499 lncRNA upstream 176489 1116349 ~ 1116684 (-) True G251505
CI01000059_00867492_00873239.mRNA mRNA downstream 66403 866665 ~ 873239 (-) True CI01000059_00867492_00873239
CI01000059_00853242_00855219.mRNA mRNA downstream 84358 852754 ~ 855284 (-) True CI01000059_00853242_00855219
CI01000059_00767393_00826328.mRNA mRNA downstream 113061 765733 ~ 826581 (-) True CI01000059_00767393_00826328
CI01000059_00697568_00720771.mRNA mRNA downstream 218871 697568 ~ 720771 (-) True CI01000059_00697568_00720771
CI01000059_00570850_00600462.mRNA mRNA downstream 338784 570850 ~ 600858 (-) True CI01000059_00570850_00600462
CI01000059_00991306_01000173.mRNA mRNA upstream 51171 991031 ~ 1000173 (-) True CI01000059_00991306_01000173
CI01000059_01022397_01031991.mRNA mRNA upstream 81878 1021738 ~ 1032204 (-) True CI01000059_01022397_01031991
CI01000059_01042330_01049708.mRNA mRNA upstream 102390 1042250 ~ 1049927 (-) True CI01000059_01042330_01049708
CI01000059_01062456_01073742.mRNA mRNA upstream 122596 1062456 ~ 1073742 (-) True CI01000059_01062456_01073742
CI01000059_01118201_01130248.mRNA mRNA upstream 177856 1117716 ~ 1130248 (-) True CI01000059_01118201_01130248
TU285270 other downstream 559505 369931 ~ 373400 (-) True G251313
TU285506 other upstream 311856 1255599 ~ 1255662 (-) True G251512
TU286339 other upstream 1156837 2099629 ~ 2099667 (-) True G252257
TU287202 other upstream 2531615 3471475 ~ 3471909 (-) True G253013
TU288177 other upstream 3813678 4753538 ~ 4754082 (-) True G253914
TU288508 other upstream 4297926 5237786 ~ 5238299 (-) True G254203

Expression Profile