RNA id: TU290278


Basic Information

Item Value
RNA id TU290278
length 224
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G255742
representative True

Chromosome Information

Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 7234115 ~ 7234338 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AAACAAGGTTTAAAATAGATGACAGACATCTAGTCTTTAAGACAACAATAGCTTTAGCCGCATTTGTTGTGGAAGTGGCTAACAGGCACATCGACTGAAATGGCAATTTGCTCAAAAATCATAAAAAATAAACACTTACTTCTTCTGGAGGATCATGAACAGTTGGTACAGATCTATCCTTGAGTACCAACTTTTTAGCAAAGCCTGCCTTGTATTGCCCCCCG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU290276 lncRNA downstream 2116 7231788 ~ 7231999 (-) True G255740
TU290271 lncRNA downstream 65262 7167506 ~ 7168853 (-) True G255735
TU290225 lncRNA downstream 187514 6932138 ~ 7046601 (-) True G255691
TU290255 lncRNA downstream 330648 6901490 ~ 6903467 (-) True G255719
TU289686 lncRNA downstream 423090 6810802 ~ 6811025 (-) True G255238
TU290231 lncRNA upstream 40084 7274422 ~ 7327314 (-) True G255697
TU290215 lncRNA upstream 87181 7321519 ~ 7325568 (-) True G255681
TU290386 lncRNA upstream 437710 7672048 ~ 7672829 (-) True G255840
TU290391 lncRNA upstream 450299 7684637 ~ 7684845 (-) True G255845
TU290401 lncRNA upstream 475255 7709593 ~ 7709962 (-) True G255855
CI01000059_07226610_07230853.mRNA mRNA downstream 3262 7226610 ~ 7230853 (-) True CI01000059_07226610_07230853
CI01000059_07222636_07225677.mRNA mRNA downstream 8438 7222453 ~ 7225677 (-) True CI01000059_07222636_07225677
CI01000059_07212957_07217869.mRNA mRNA downstream 16246 7212957 ~ 7217869 (-) True CI01000059_07212957_07217869
CI01000059_07156085_07160233.mRNA mRNA downstream 73882 7155716 ~ 7160233 (-) True CI01000059_07156085_07160233
CI01000059_07144283_07150061.mRNA mRNA downstream 81414 7143846 ~ 7152701 (-) True CI01000059_07144283_07150061
CI01000059_07379550_07383609.mRNA mRNA upstream 144588 7378926 ~ 7383674 (-) True CI01000059_07379550_07383609
CI01000059_07399949_07406822.mRNA mRNA upstream 165592 7399930 ~ 7406992 (-) True CI01000059_07399949_07406822
CI01000059_07418303_07423995.mRNA mRNA upstream 183754 7418092 ~ 7424051 (-) True CI01000059_07418303_07423995
CI01000059_07439674_07465822.mRNA mRNA upstream 205336 7439674 ~ 7465822 (-) True CI01000059_07439674_07465822
CI01000059_07486966_07501055.mRNA mRNA upstream 252500 7486838 ~ 7501461 (-) True CI01000059_07486966_07501055
TU289512 other downstream 991323 6236106 ~ 6242792 (-) True G255092
TU288508 other downstream 1995816 5237786 ~ 5238299 (-) True G254203
TU288177 other downstream 2480033 4753538 ~ 4754082 (-) True G253914
TU287202 other downstream 3762206 3471475 ~ 3471909 (-) True G253013
TU286339 other downstream 5134448 2099629 ~ 2099667 (-) True G252257
TU291574 other upstream 1747358 8981696 ~ 8982117 (-) False G256890
TU291575 other upstream 1747358 8981696 ~ 8982117 (-) True G256890
TU291707 other upstream 2219878 9454216 ~ 9599008 (-) True G257014

Expression Profile