RNA id: TU291327


Basic Information

Item Value
RNA id TU291327
length 244
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G256669
representative True

Chromosome Information

Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 8482524 ~ 8482767 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ATTAACTAGCTTCTACCAGACAATTATACGCATACTGCGCAAGTCTTGAGCTCCTCTTATATCGAAATCCTCCAACATTTCTCTTTAAAAATTCGCGTTTTAGACTTCTAATTTGTGACCAGTGTTTTGTTTTGCTCTATCCTCTGAGCTTCTGCATTTGTGCCGTAAATGTGCCGCAAATCGATTTGTCCGGTCATCTGCCGGATACTAGTTATTATACTTAAAGTTTTAATATGGATATTTT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU291277 lncRNA downstream 157805 8323669 ~ 8324719 (-) True G256626
TU291279 lncRNA downstream 199319 8282110 ~ 8283205 (-) True G256628
TU291298 lncRNA downstream 220843 8261465 ~ 8261681 (-) True G256643
TU291287 lncRNA downstream 231733 8249522 ~ 8250791 (-) True G256636
TU291284 lncRNA downstream 248016 8234221 ~ 8234508 (-) True G256633
TU291331 lncRNA upstream 678 8522131 ~ 8522285 (-) True G256670
TU291366 lncRNA upstream 65128 8547895 ~ 8548638 (-) True G256700
TU291375 lncRNA upstream 99272 8582039 ~ 8582374 (-) True G256709
TU291378 lncRNA upstream 105631 8588398 ~ 8588626 (-) True G256712
TU291379 lncRNA upstream 106565 8589332 ~ 8589537 (-) True G256713
CI01000059_08434015_08446002.mRNA mRNA downstream 36522 8433695 ~ 8446002 (-) True CI01000059_08434015_08446002
CI01000059_08382830_08423907.mRNA mRNA downstream 57800 8382372 ~ 8424724 (-) True CI01000059_08382830_08423907
CI01000059_08360308_08360726.mRNA mRNA downstream 121717 8359765 ~ 8360807 (-) True CI01000059_08360308_08360726
CI01000059_08354408_08356482.mRNA mRNA downstream 125972 8352608 ~ 8356552 (-) True CI01000059_08354408_08356482
CI01000059_08334902_08338268.mRNA mRNA downstream 144256 8334743 ~ 8338268 (-) True CI01000059_08334902_08338268
CI01000059_08483765_08492276.mRNA mRNA upstream 691 8483458 ~ 8492818 (-) False CI01000059_08483765_08492276
CI01000059_08541617_08550032.mRNA mRNA upstream 58394 8541161 ~ 8550032 (-) True CI01000059_08541617_08550032
CI01000059_09346204_09347082.mRNA mRNA upstream 863421 9346188 ~ 9348023 (-) True CI01000059_09346204_09347082
CI01000059_09706218_09708197.mRNA mRNA upstream 1222503 9705270 ~ 9709619 (-) True CI01000059_09706218_09708197
CI01000059_09783667_09789126.mRNA mRNA upstream 1300862 9783629 ~ 9789298 (-) True CI01000059_09783667_09789126
TU289512 other downstream 2239732 6236106 ~ 6242792 (-) True G255092
TU288508 other downstream 3244225 5237786 ~ 5238299 (-) True G254203
TU288177 other downstream 3728442 4753538 ~ 4754082 (-) True G253914
TU287202 other downstream 5010615 3471475 ~ 3471909 (-) True G253013
TU286339 other downstream 6382857 2099629 ~ 2099667 (-) True G252257
TU291574 other upstream 498929 8981696 ~ 8982117 (-) False G256890
TU291575 other upstream 498929 8981696 ~ 8982117 (-) True G256890
TU291707 other upstream 971449 9454216 ~ 9599008 (-) True G257014

Expression Profile