RNA id: TU291639



Basic Information


Item Value
RNA id TU291639
length 298
lncRNA type antisense_over
GC content 0.08
exon number 3
gene id G256951
representative False

Chromosome Information


Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 9126780 ~ 9280018 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


AATAACTATTTGAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAATGTAAAAAAAAAAAAAAAAAAAAAAAAATTAACAAGTTATGAAGTAGAATATCCAGCTTCCACCAGAATTACGAAGATTCAAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU291632 lncRNA downstream 67136 9115978 ~ 9116179 (-) True G256947
TU291614 lncRNA downstream 131681 9051417 ~ 9051634 (-) True G256929
TU291565 lncRNA downstream 170568 9012127 ~ 9012747 (-) True G256883
TU291500 lncRNA downstream 176951 8997393 ~ 9006364 (-) True G256820
TU291583 lncRNA downstream 184522 8996383 ~ 8998793 (-) True G256898
TU291713 lncRNA upstream 102383 9367807 ~ 9369543 (-) True G257020
TU291725 lncRNA upstream 119249 9384673 ~ 9415201 (-) True G257031
TU291854 lncRNA upstream 326162 9591586 ~ 9593365 (-) True G257156
TU291857 lncRNA upstream 329068 9594492 ~ 9613237 (-) True G257158
TU291858 lncRNA upstream 329583 9595007 ~ 9613501 (-) True G257159
CI01000059_08541617_08550032.mRNA mRNA downstream 633283 8541161 ~ 8550032 (-) True CI01000059_08541617_08550032
CI01000059_08483765_08492276.mRNA mRNA downstream 690497 8483458 ~ 8492818 (-) False CI01000059_08483765_08492276
CI01000059_08434015_08446002.mRNA mRNA downstream 737313 8433695 ~ 8446002 (-) True CI01000059_08434015_08446002
CI01000059_08382830_08423907.mRNA mRNA downstream 758591 8382372 ~ 8424724 (-) True CI01000059_08382830_08423907
CI01000059_08360308_08360726.mRNA mRNA downstream 822508 8359765 ~ 8360807 (-) True CI01000059_08360308_08360726
CI01000059_09346204_09347082.mRNA mRNA upstream 80764 9346188 ~ 9348023 (-) True CI01000059_09346204_09347082
CI01000059_09706218_09708197.mRNA mRNA upstream 439846 9705270 ~ 9709619 (-) True CI01000059_09706218_09708197
CI01000059_09783667_09789126.mRNA mRNA upstream 518205 9783629 ~ 9789298 (-) True CI01000059_09783667_09789126
CI01000059_09797419_09887264.mRNA mRNA upstream 531956 9797380 ~ 9887264 (-) True CI01000059_09797419_09887264
CI01000059_09908635_09925766.mRNA mRNA upstream 642463 9907887 ~ 9925766 (-) True CI01000059_09908635_09925766
TU291574 other downstream 201198 8981696 ~ 8982117 (-) False G256890
TU291575 other downstream 201198 8981696 ~ 8982117 (-) True G256890
TU289512 other downstream 2940523 6236106 ~ 6242792 (-) True G255092
TU288508 other downstream 3945016 5237786 ~ 5238299 (-) True G254203
TU288177 other downstream 4429233 4753538 ~ 4754082 (-) True G253914
TU291707 other upstream 188792 9454216 ~ 9599008 (-) True G257014

Expression Profile