RNA id: TU291713


Basic Information

Item Value
RNA id TU291713
length 256
lncRNA type inter_gene
GC content 0.26
exon number 2
gene id G257020
representative True

Chromosome Information

Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 9367807 ~ 9369543 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AATACTTCATTTTAAACTACAGTTTTAGTAGATTTATAAGCTGTTTAATAGGCTAAAGTAAAGAGTGAAGAATAATTCGCTGGATAATGTTAAATAACTGAATAATATTCTCTGGAATATTGGAATATAACAAACAAAACATCGTATTTTATTGCATTTCTCAACTGGTATGTTATATCAGAATTATTAATAATGTTTTTGTTGTTCTAGATTATGAAATATCTGCTGACAAAGCACTGTTTATCTATGCATTTAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU291641 lncRNA downstream 87789 9126780 ~ 9280018 (-) False G256951
TU291644 lncRNA downstream 102333 9197239 ~ 9265474 (-) True G256951
TU291639 lncRNA downstream 102383 9183315 ~ 9265424 (-) False G256951
TU291640 lncRNA downstream 110329 9197239 ~ 9257478 (-) False G256951
TU291637 lncRNA downstream 143390 9197239 ~ 9224417 (-) False G256951
TU291725 lncRNA upstream 15130 9384673 ~ 9415201 (-) True G257031
TU291854 lncRNA upstream 222043 9591586 ~ 9593365 (-) True G257156
TU291857 lncRNA upstream 224949 9594492 ~ 9613237 (-) True G257158
TU291858 lncRNA upstream 225464 9595007 ~ 9613501 (-) True G257159
TU291872 lncRNA upstream 250196 9619739 ~ 9638396 (-) True G257172
CI01000059_09346204_09347082.mRNA mRNA downstream 19784 9346188 ~ 9348023 (-) True CI01000059_09346204_09347082
CI01000059_08541617_08550032.mRNA mRNA downstream 817775 8541161 ~ 8550032 (-) True CI01000059_08541617_08550032
CI01000059_08483765_08492276.mRNA mRNA downstream 874989 8483458 ~ 8492818 (-) False CI01000059_08483765_08492276
CI01000059_08434015_08446002.mRNA mRNA downstream 921805 8433695 ~ 8446002 (-) True CI01000059_08434015_08446002
CI01000059_08382830_08423907.mRNA mRNA downstream 943083 8382372 ~ 8424724 (-) True CI01000059_08382830_08423907
CI01000059_09706218_09708197.mRNA mRNA upstream 335727 9705270 ~ 9709619 (-) True CI01000059_09706218_09708197
CI01000059_09783667_09789126.mRNA mRNA upstream 414086 9783629 ~ 9789298 (-) True CI01000059_09783667_09789126
CI01000059_09797419_09887264.mRNA mRNA upstream 427837 9797380 ~ 9887264 (-) True CI01000059_09797419_09887264
CI01000059_09908635_09925766.mRNA mRNA upstream 538344 9907887 ~ 9925766 (-) True CI01000059_09908635_09925766
CI01000059_09990989_09995182.mRNA mRNA upstream 619960 9989503 ~ 9995251 (-) True CI01000059_09990989_09995182
TU291574 other downstream 385690 8981696 ~ 8982117 (-) False G256890
TU291575 other downstream 385690 8981696 ~ 8982117 (-) True G256890
TU289512 other downstream 3125015 6236106 ~ 6242792 (-) True G255092
TU288508 other downstream 4129508 5237786 ~ 5238299 (-) True G254203
TU288177 other downstream 4613725 4753538 ~ 4754082 (-) True G253914
TU291707 other upstream 84673 9454216 ~ 9599008 (-) True G257014

Expression Profile