RNA id: TU291945



Basic Information


Item Value
RNA id TU291945
length 217
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G257244
representative True

Chromosome Information


Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 9775153 ~ 9775369 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TTTGACTTTTGTTCAACTCAAGTCAAATGGCTTAGTGTGAGGAATTTAGAAGAAACAATGCTATGTTGAGTTCAATTGCTTACAAAATTCCTTCAACCCTTTTGCTTTCCTTAAATACCCAGATCAAAAAACACATCCTTCAAATCGAGACAACTAACAATTAGAGCTTATAAATAAACAGGACCCTGGACCTATGGGTTCACGCAGGGTACAGGAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU291937 lncRNA downstream 36062 9736229 ~ 9739091 (-) True G257236
TU291928 lncRNA downstream 41930 9727621 ~ 9733223 (-) True G257227
TU291872 lncRNA downstream 136757 9619739 ~ 9638396 (-) True G257172
TU291858 lncRNA downstream 161652 9595007 ~ 9613501 (-) True G257159
TU291857 lncRNA downstream 161916 9594492 ~ 9613237 (-) True G257158
TU291946 lncRNA upstream 837 9776206 ~ 9776475 (-) True G257245
TU291971 lncRNA upstream 189673 9965042 ~ 9965268 (-) True G257270
TU291973 lncRNA upstream 193067 9968436 ~ 9968675 (-) True G257272
TU291976 lncRNA upstream 198991 9974360 ~ 9974595 (-) True G257275
TU291977 lncRNA upstream 200245 9975614 ~ 9976040 (-) True G257276
CI01000059_09706218_09708197.mRNA mRNA downstream 65534 9705270 ~ 9709619 (-) True CI01000059_09706218_09708197
CI01000059_09346204_09347082.mRNA mRNA downstream 427130 9346188 ~ 9348023 (-) True CI01000059_09346204_09347082
CI01000059_08541617_08550032.mRNA mRNA downstream 1225121 8541161 ~ 8550032 (-) True CI01000059_08541617_08550032
CI01000059_08483765_08492276.mRNA mRNA downstream 1282335 8483458 ~ 8492818 (-) False CI01000059_08483765_08492276
CI01000059_08434015_08446002.mRNA mRNA downstream 1329151 8433695 ~ 8446002 (-) True CI01000059_08434015_08446002
CI01000059_09783667_09789126.mRNA mRNA upstream 8260 9783629 ~ 9789298 (-) True CI01000059_09783667_09789126
CI01000059_09797419_09887264.mRNA mRNA upstream 22011 9797380 ~ 9887264 (-) True CI01000059_09797419_09887264
CI01000059_09908635_09925766.mRNA mRNA upstream 132518 9907887 ~ 9925766 (-) True CI01000059_09908635_09925766
CI01000059_09990989_09995182.mRNA mRNA upstream 214134 9989503 ~ 9995251 (-) True CI01000059_09990989_09995182
CI01000059_09996144_10002811.mRNA mRNA upstream 220684 9996053 ~ 10002862 (-) True CI01000059_09996144_10002811
TU291707 other downstream 176145 9454216 ~ 9599008 (-) True G257014
TU291574 other downstream 793036 8981696 ~ 8982117 (-) False G256890
TU291575 other downstream 793036 8981696 ~ 8982117 (-) True G256890
TU289512 other downstream 3532361 6236106 ~ 6242792 (-) True G255092
TU288508 other downstream 4536854 5237786 ~ 5238299 (-) True G254203

Expression Profile