RNA id: TU291976



Basic Information


Item Value
RNA id TU291976
length 236
lncRNA type inter_gene
GC content 0.34
exon number 1
gene id G257275
representative True

Chromosome Information


Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 9974360 ~ 9974595 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ACAAGTCTGCTCACAGCGAACATTCAGATCTGATCCAGAGAGAGCCGTTGTCATGTATAGATATGAAACCGCTTCACAAACAGTTTTTTCAACCACACATTATCATTATTTCTGTCTTACAATCATTCAAATTATCATAGAAGTTCTGGGATAAAAGTTTATAGTTCAGAAATAAACACTGATGTGTACAGTAGAGATCAAAATAGAGTAAATCACCTTTTGAAAGAAACTTGTCG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU291973 lncRNA downstream 5685 9968436 ~ 9968675 (-) True G257272
TU291971 lncRNA downstream 9092 9965042 ~ 9965268 (-) True G257270
TU291946 lncRNA downstream 197885 9776206 ~ 9776475 (-) True G257245
TU291945 lncRNA downstream 198991 9775153 ~ 9775369 (-) True G257244
TU291937 lncRNA downstream 235269 9736229 ~ 9739091 (-) True G257236
TU291977 lncRNA upstream 1019 9975614 ~ 9976040 (-) True G257276
TU291983 lncRNA upstream 35485 10010080 ~ 10010806 (-) True G257282
TU292002 lncRNA upstream 123121 10097716 ~ 10097915 (-) True G257299
TU291757 lncRNA upstream 141770 10116365 ~ 10153140 (-) False G257063
TU291758 lncRNA upstream 141770 10116365 ~ 10204537 (-) True G257063
CI01000059_09908635_09925766.mRNA mRNA downstream 48594 9907887 ~ 9925766 (-) True CI01000059_09908635_09925766
CI01000059_09797419_09887264.mRNA mRNA downstream 87096 9797380 ~ 9887264 (-) True CI01000059_09797419_09887264
CI01000059_09783667_09789126.mRNA mRNA downstream 185062 9783629 ~ 9789298 (-) True CI01000059_09783667_09789126
CI01000059_09706218_09708197.mRNA mRNA downstream 264741 9705270 ~ 9709619 (-) True CI01000059_09706218_09708197
CI01000059_09346204_09347082.mRNA mRNA downstream 626337 9346188 ~ 9348023 (-) True CI01000059_09346204_09347082
CI01000059_09990989_09995182.mRNA mRNA upstream 14908 9989503 ~ 9995251 (-) True CI01000059_09990989_09995182
CI01000059_09996144_10002811.mRNA mRNA upstream 21458 9996053 ~ 10002862 (-) True CI01000059_09996144_10002811
CI01000059_10006537_10067807.mRNA mRNA upstream 31850 10006445 ~ 10067845 (-) True CI01000059_10006537_10067807
CI01000059_10078245_10087217.mRNA mRNA upstream 103607 10078202 ~ 10087217 (-) True CI01000059_10078245_10087217
CI01000059_10112766_10123616.mRNA mRNA upstream 137715 10112310 ~ 10123616 (-) True CI01000059_10112766_10123616
TU291707 other downstream 375352 9454216 ~ 9599008 (-) True G257014
TU291574 other downstream 992243 8981696 ~ 8982117 (-) False G256890
TU291575 other downstream 992243 8981696 ~ 8982117 (-) True G256890
TU289512 other downstream 3731568 6236106 ~ 6242792 (-) True G255092
TU288508 other downstream 4736061 5237786 ~ 5238299 (-) True G254203

Expression Profile