RNA id: CI01000062_00205449_00208640.mRNA


Basic Information

Item Value
RNA id CI01000062_00205449_00208640.mRNA
length 424
RNA type mRNA
GC content 0.49
exon number 3
gene id CI01000062_00205449_00208640
representative False

Chromosome Information

Item Value
chromosome id CI01000062
NCBI id null
chromosome length 4496499
location 205449 ~ 208640 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GAAGTTGTCCCTTCCTGCTTTAAGGCCGCCACTATTATACCAGTGCCAAAGCATTCTACTGCATCAGCCCTGAATGACTTTCGCCCAGTAGCACTTACCACCATCATTGCTAAGTGCTTTGAGAGACTGGTTTTACTACATTTGAGAGCCAGTCTTCCCACAGCCCTGGATCTTCACCAGTATGCCTACCGTACAAACAGGTCAACGGAGGATGCCATCTCCACAGCACTCCATTCTGCTTTGACCCATCTGGACAGTCCCAATTCTTATTGGGGTTACACCTCCAAAGAAGACTTCTCAGAGTGTTTTCTGAAGTGGTATTTGTCCTGCGGTTTTGCAGTTGCTGTAGTCGGTGCTCCAGCTGGTATCAGCCAAGCAGTGATTCGTTCTTTGTCTTCTGCCATCGTGGGACCTGATGAACAAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU293544 lncRNA downstream 24634 180487 ~ 180815 (-) True G258535
TU293539 lncRNA downstream 33056 172002 ~ 172393 (-) True G258532
TU293334 lncRNA downstream 57421 147594 ~ 148028 (-) True G258400
TU293331 lncRNA downstream 59631 145510 ~ 145818 (-) True G258397
TU293321 lncRNA downstream 68604 136600 ~ 136845 (-) True G258387
TU293541 lncRNA upstream 6462 220586 ~ 220809 (-) True G258534
TU293559 lncRNA upstream 28860 237500 ~ 237732 (-) True G258549
TU293617 lncRNA upstream 51215 259855 ~ 260168 (-) True G258603
TU293717 lncRNA upstream 200275 408915 ~ 409146 (-) True G258703
TU294480 lncRNA upstream 481073 689713 ~ 728536 (-) True G259368
CI01000062_00000216_00015634.mRNA mRNA downstream 189815 216 ~ 15634 (-) False CI01000062_00000216_00015634
CI01000062_00215004_00216872.mRNA mRNA upstream 5862 214502 ~ 216872 (-) False CI01000062_00215004_00216872
CI01000062_00459377_00459927.mRNA mRNA upstream 250537 459177 ~ 460140 (-) True CI01000062_00459377_00459927
CI01000062_00491892_00492929.mRNA mRNA upstream 283209 491849 ~ 493776 (-) True CI01000062_00491892_00492929
CI01000062_00501459_00565291.mRNA mRNA upstream 292819 501459 ~ 565291 (-) True CI01000062_00501459_00565291
CI01000062_00576651_00595216.mRNA mRNA upstream 367772 576412 ~ 595867 (-) True CI01000062_00576651_00595216
TU293258 other downstream 189737 13737 ~ 13821 (-) True G258325
TU296692 other upstream 3736795 3945435 ~ 3957385 (-) True G261400

Expression Profile