RNA id: TU294580



Basic Information


Item Value
RNA id TU294580
length 205
lncRNA type antisense_over
GC content 0.40
exon number 2
gene id G259465
representative True

Chromosome Information


Item Value
chromosome id CI01000062
NCBI id null
chromosome length 4496499
location 1019507 ~ 1105910 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CTTACATATAATCAGATACAGTATCAAACATGCATATTTGGCGTGCTGTCTGAGGACAGGGCAAGTTCGGAATTTGGCCTGATCCCAGAGCACCTCCCAGATATTTTTGATTTCATTTTAGTATACAAGTCTGACTTAAAGGGACAGTTCACCCAAAAATGAAAATTCTATCATTAATTTCTCACCCTCATGTTGTTCCACACCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU294495 lncRNA downstream 9339 1009969 ~ 1010168 (-) True G259382
TU294535 lncRNA downstream 240527 778684 ~ 778980 (-) True G259421
TU294533 lncRNA downstream 257546 761758 ~ 761961 (-) True G259419
TU294531 lncRNA downstream 271393 747864 ~ 748114 (-) True G259417
TU294530 lncRNA downstream 275206 744095 ~ 744301 (-) True G259416
TU294635 lncRNA upstream 226923 1332833 ~ 1340353 (-) False G259516
TU294636 lncRNA upstream 227018 1332928 ~ 1340498 (-) True G259516
TU294728 lncRNA upstream 384020 1489930 ~ 1496220 (-) False G259597
TU294729 lncRNA upstream 384020 1489930 ~ 1499660 (-) True G259597
TU294730 lncRNA upstream 399137 1505047 ~ 1510116 (-) True G259598
CI01000062_00963254_00999381.mRNA mRNA downstream 20126 963206 ~ 999381 (-) False CI01000062_00963254_00999381
CI01000062_00953238_00953543.mRNA mRNA downstream 65492 952511 ~ 954015 (-) True CI01000062_00953238_00953543
CI01000062_00877361_00878217.mRNA mRNA downstream 140832 875653 ~ 878675 (-) True CI01000062_00877361_00878217
CI01000062_00842607_00851041.mRNA mRNA downstream 168466 842416 ~ 851041 (-) True CI01000062_00842607_00851041
CI01000062_00808148_00808981.mRNA mRNA downstream 210405 807733 ~ 809102 (-) True CI01000062_00808148_00808981
CI01000062_01131089_01166027.mRNA mRNA upstream 24955 1130865 ~ 1166607 (-) True CI01000062_01131089_01166027
CI01000062_01191296_01194695.mRNA mRNA upstream 84783 1190693 ~ 1194695 (-) True CI01000062_01191296_01194695
CI01000062_01210373_01227487.mRNA mRNA upstream 104150 1210060 ~ 1227487 (-) True CI01000062_01210373_01227487
CI01000062_01361295_01382538.mRNA mRNA upstream 255385 1361295 ~ 1382771 (-) True CI01000062_01361295_01382538
CI01000062_01401358_01417189.mRNA mRNA upstream 294495 1400405 ~ 1417189 (-) True CI01000062_01401358_01417189
TU293258 other downstream 1003795 13737 ~ 13821 (-) True G258325
TU296692 other upstream 2839525 3945435 ~ 3957385 (-) True G261400

Expression Profile