RNA id: TU294730


Basic Information

Item Value
RNA id TU294730
length 520
lncRNA type antisense_over
GC content 0.50
exon number 2
gene id G259598
representative True

Chromosome Information

Item Value
chromosome id CI01000062
NCBI id null
chromosome length 4496499
location 1505047 ~ 1510116 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ACAGGAGACCGTCTGCCTGGCTGGGATCTAAAGACTGAAAATAATACAGGTTTGGAATGACATGAGGTTGAGTAACGATGGCTGAATTTCCATATTTAACCCTTGAAAGTGACGGTACGTACCCATGAGGAATGCTCCTTCATCTGGTGCTGGTTGCTATGGGGACCGCTGGCATGACCGCGCCAGAAGCAGCTCTGACAAAGCTGGTAGCCATGGCACTGCTGGCAGCGGTACCGGAAACCCATCATGCTCTCACTCCGGCAGTACGAACATTCCACTGGATGGAAGACTGTGGGACAGCAGCACAAAGGCTTTCATGCATTCGCAAACCTTGTTTTAGCCATATTTTGTGAGTGAGGTGTCCAGACGTAGTGGGCGATGGGAAATAAGTCATTAAAAACCCACATACAATCCACTCGCAGCACGTACCATTCTCTACATTAGCGAGTCGGTGCATGAGAGGTAGCCATACGAGGTACTGCGGGGGTGGATCTGCCATCAACACATCCAAAAACGTATT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU294729 lncRNA downstream 5387 1489930 ~ 1499660 (-) True G259597
TU294728 lncRNA downstream 8827 1489930 ~ 1496220 (-) False G259597
TU294636 lncRNA downstream 164549 1332928 ~ 1340498 (-) True G259516
TU294635 lncRNA downstream 164694 1332833 ~ 1340353 (-) False G259516
TU294580 lncRNA downstream 399137 1019507 ~ 1105910 (-) True G259465
TU294751 lncRNA upstream 15909 1526025 ~ 1526401 (-) True G259619
TU294763 lncRNA upstream 19894 1530010 ~ 1530435 (-) True G259630
TU294766 lncRNA upstream 24329 1534445 ~ 1535935 (-) True G259633
TU294765 lncRNA upstream 30986 1541102 ~ 1545059 (-) True G259632
TU294768 lncRNA upstream 38379 1548495 ~ 1548697 (-) True G259635
CI01000062_01419375_01443524.mRNA mRNA downstream 61348 1419087 ~ 1443699 (-) True CI01000062_01419375_01443524
CI01000062_01401358_01417189.mRNA mRNA downstream 87858 1400405 ~ 1417189 (-) True CI01000062_01401358_01417189
CI01000062_01361295_01382538.mRNA mRNA downstream 122276 1361295 ~ 1382771 (-) True CI01000062_01361295_01382538
CI01000062_01210373_01227487.mRNA mRNA downstream 277560 1210060 ~ 1227487 (-) True CI01000062_01210373_01227487
CI01000062_01191296_01194695.mRNA mRNA downstream 310352 1190693 ~ 1194695 (-) True CI01000062_01191296_01194695
CI01000062_01747676_01766964.mRNA mRNA upstream 237560 1747676 ~ 1766964 (-) True CI01000062_01747676_01766964
CI01000062_01787025_01788167.mRNA mRNA upstream 276900 1787016 ~ 1788512 (-) True CI01000062_01787025_01788167
CI01000062_02087992_02119506.mRNA mRNA upstream 577855 2087971 ~ 2120066 (-) True CI01000062_02087992_02119506
CI01000062_02287961_02292055.mRNA mRNA upstream 777267 2287383 ~ 2292092 (-) True CI01000062_02287961_02292055
CI01000062_02400091_02406400.mRNA mRNA upstream 889638 2399754 ~ 2406400 (-) True CI01000062_02400091_02406400
TU293258 other downstream 1489335 13737 ~ 13821 (-) True G258325
TU296692 other upstream 2435319 3945435 ~ 3957385 (-) True G261400

Expression Profile