RNA id: TU294888



Basic Information


Item Value
RNA id TU294888
length 232
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G259745
representative True

Chromosome Information


Item Value
chromosome id CI01000062
NCBI id null
chromosome length 4496499
location 1834059 ~ 1834290 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TTGCTTTTCACTCTGTACATGCTACCCTTGGGAGATATCATTAGGAAGCATGGCGTTAGTTTTCACTGTTACGCTGATGATACTCAGCTCTATATTTCTTCACGCCCTGACGAAACTTACCAATTCACAAAATTAACGGAATGCATAGCTGATATAAAAAATTGGATGACCAGTAATTTCCTACTACTAAATTCAGAAAAAAACAGAGATTCTAATTTTTGGAGCAAAAACT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU294880 lncRNA downstream 15907 1817809 ~ 1818152 (-) True G259737
TU294868 lncRNA downstream 41504 1792286 ~ 1792555 (-) True G259725
TU294841 lncRNA downstream 95794 1737471 ~ 1738265 (-) True G259705
TU294809 lncRNA downstream 185602 1648257 ~ 1648457 (-) True G259675
TU294759 lncRNA downstream 244140 1577744 ~ 1589919 (-) True G259626
TU294890 lncRNA upstream 3422 1837712 ~ 1837921 (-) True G259747
TU294893 lncRNA upstream 5303 1839593 ~ 1839892 (-) True G259750
TU294897 lncRNA upstream 10373 1844663 ~ 1844896 (-) True G259754
TU294898 lncRNA upstream 11414 1845704 ~ 1845925 (-) True G259755
TU294912 lncRNA upstream 54482 1888772 ~ 1889031 (-) True G259769
CI01000062_01787025_01788167.mRNA mRNA downstream 45547 1787016 ~ 1788512 (-) True CI01000062_01787025_01788167
CI01000062_01747676_01766964.mRNA mRNA downstream 67095 1747676 ~ 1766964 (-) True CI01000062_01747676_01766964
CI01000062_01419375_01443524.mRNA mRNA downstream 390360 1419087 ~ 1443699 (-) True CI01000062_01419375_01443524
CI01000062_01401358_01417189.mRNA mRNA downstream 416870 1400405 ~ 1417189 (-) True CI01000062_01401358_01417189
CI01000062_01361295_01382538.mRNA mRNA downstream 451288 1361295 ~ 1382771 (-) True CI01000062_01361295_01382538
CI01000062_02087992_02119506.mRNA mRNA upstream 253681 2087971 ~ 2120066 (-) True CI01000062_02087992_02119506
CI01000062_02287961_02292055.mRNA mRNA upstream 453093 2287383 ~ 2292092 (-) True CI01000062_02287961_02292055
CI01000062_02400091_02406400.mRNA mRNA upstream 565464 2399754 ~ 2406400 (-) True CI01000062_02400091_02406400
CI01000062_02473721_02477346.mRNA mRNA upstream 639244 2473534 ~ 2477346 (-) True CI01000062_02473721_02477346
CI01000062_02488009_02560794.mRNA mRNA upstream 653519 2487809 ~ 2562434 (-) True CI01000062_02488009_02560794
TU293258 other downstream 1818347 13737 ~ 13821 (-) True G258325
TU296692 other upstream 2111145 3945435 ~ 3957385 (-) True G261400

Expression Profile