RNA id: TU294890



Basic Information


Item Value
RNA id TU294890
length 210
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G259747
representative True

Chromosome Information


Item Value
chromosome id CI01000062
NCBI id null
chromosome length 4496499
location 1837712 ~ 1837921 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CTTGTTTAACTCTGCCTATATAAACCCGGTGTTCTCAGGCCCTGTTTACACTAGTGCGTTTTAGTTTTAAAACGTGTAACTTTTGCTATGTTTACACTACTCTGGCATTTTCGACCCTCAAAAACGGAGACTTTTGGAAACGCTGCAGGATGTGTTTTAGTTTGAAAATGCCTGGGTTGCGTTTCAGTGTAAATGGACCAAAACGGAGAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU294888 lncRNA downstream 3422 1834059 ~ 1834290 (-) True G259745
TU294880 lncRNA downstream 19560 1817809 ~ 1818152 (-) True G259737
TU294868 lncRNA downstream 45157 1792286 ~ 1792555 (-) True G259725
TU294841 lncRNA downstream 99447 1737471 ~ 1738265 (-) True G259705
TU294809 lncRNA downstream 189255 1648257 ~ 1648457 (-) True G259675
TU294893 lncRNA upstream 1672 1839593 ~ 1839892 (-) True G259750
TU294897 lncRNA upstream 6742 1844663 ~ 1844896 (-) True G259754
TU294898 lncRNA upstream 7783 1845704 ~ 1845925 (-) True G259755
TU294912 lncRNA upstream 50851 1888772 ~ 1889031 (-) True G259769
TU294923 lncRNA upstream 80508 1918429 ~ 1918736 (-) True G259779
CI01000062_01787025_01788167.mRNA mRNA downstream 49200 1787016 ~ 1788512 (-) True CI01000062_01787025_01788167
CI01000062_01747676_01766964.mRNA mRNA downstream 70748 1747676 ~ 1766964 (-) True CI01000062_01747676_01766964
CI01000062_01419375_01443524.mRNA mRNA downstream 394013 1419087 ~ 1443699 (-) True CI01000062_01419375_01443524
CI01000062_01401358_01417189.mRNA mRNA downstream 420523 1400405 ~ 1417189 (-) True CI01000062_01401358_01417189
CI01000062_01361295_01382538.mRNA mRNA downstream 454941 1361295 ~ 1382771 (-) True CI01000062_01361295_01382538
CI01000062_02087992_02119506.mRNA mRNA upstream 250050 2087971 ~ 2120066 (-) True CI01000062_02087992_02119506
CI01000062_02287961_02292055.mRNA mRNA upstream 449462 2287383 ~ 2292092 (-) True CI01000062_02287961_02292055
CI01000062_02400091_02406400.mRNA mRNA upstream 561833 2399754 ~ 2406400 (-) True CI01000062_02400091_02406400
CI01000062_02473721_02477346.mRNA mRNA upstream 635613 2473534 ~ 2477346 (-) True CI01000062_02473721_02477346
CI01000062_02488009_02560794.mRNA mRNA upstream 649888 2487809 ~ 2562434 (-) True CI01000062_02488009_02560794
TU293258 other downstream 1822000 13737 ~ 13821 (-) True G258325
TU296692 other upstream 2107514 3945435 ~ 3957385 (-) True G261400

Expression Profile