RNA id: TU294893


Basic Information

Item Value
RNA id TU294893
length 300
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G259750
representative True

Chromosome Information

Item Value
chromosome id CI01000062
NCBI id null
chromosome length 4496499
location 1839593 ~ 1839892 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TTGCTTTCTCTTGGGGATCAGAAACCTCTCGGATTTCATCAAAAATATCTTAATTTTTGTTCCGAAGATGAGCGAAGGTCTTATGGGTGTGGAACGACATGAGGGTGAGTAATTAATGACAGAAATGTCATTTTTGGGTGAGCTATCCCTTTAAGTTGGAGGTGTCCTTCTGACTCCTTCATATTTGAGGTATGTTCTGAGATCTGTTGATAGGCATTGTGTTTAGGTTTACTAGGTTTACCTTCTAACAGACTGGTCAAAGCACAGTAAAAAAAAAAAACTAAAGTAAGAACGGGCTGC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU294890 lncRNA downstream 1672 1837712 ~ 1837921 (-) True G259747
TU294888 lncRNA downstream 5303 1834059 ~ 1834290 (-) True G259745
TU294880 lncRNA downstream 21441 1817809 ~ 1818152 (-) True G259737
TU294868 lncRNA downstream 47038 1792286 ~ 1792555 (-) True G259725
TU294841 lncRNA downstream 101328 1737471 ~ 1738265 (-) True G259705
TU294897 lncRNA upstream 4771 1844663 ~ 1844896 (-) True G259754
TU294898 lncRNA upstream 5812 1845704 ~ 1845925 (-) True G259755
TU294912 lncRNA upstream 48880 1888772 ~ 1889031 (-) True G259769
TU294923 lncRNA upstream 78537 1918429 ~ 1918736 (-) True G259779
TU294926 lncRNA upstream 100789 1940681 ~ 1940957 (-) True G259782
CI01000062_01787025_01788167.mRNA mRNA downstream 51081 1787016 ~ 1788512 (-) True CI01000062_01787025_01788167
CI01000062_01747676_01766964.mRNA mRNA downstream 72629 1747676 ~ 1766964 (-) True CI01000062_01747676_01766964
CI01000062_01419375_01443524.mRNA mRNA downstream 395894 1419087 ~ 1443699 (-) True CI01000062_01419375_01443524
CI01000062_01401358_01417189.mRNA mRNA downstream 422404 1400405 ~ 1417189 (-) True CI01000062_01401358_01417189
CI01000062_01361295_01382538.mRNA mRNA downstream 456822 1361295 ~ 1382771 (-) True CI01000062_01361295_01382538
CI01000062_02087992_02119506.mRNA mRNA upstream 248079 2087971 ~ 2120066 (-) True CI01000062_02087992_02119506
CI01000062_02287961_02292055.mRNA mRNA upstream 447491 2287383 ~ 2292092 (-) True CI01000062_02287961_02292055
CI01000062_02400091_02406400.mRNA mRNA upstream 559862 2399754 ~ 2406400 (-) True CI01000062_02400091_02406400
CI01000062_02473721_02477346.mRNA mRNA upstream 633642 2473534 ~ 2477346 (-) True CI01000062_02473721_02477346
CI01000062_02488009_02560794.mRNA mRNA upstream 647917 2487809 ~ 2562434 (-) True CI01000062_02488009_02560794
TU293258 other downstream 1823881 13737 ~ 13821 (-) True G258325
TU296692 other upstream 2105543 3945435 ~ 3957385 (-) True G261400

Expression Profile