RNA id: TU294912



Basic Information


Item Value
RNA id TU294912
length 260
lncRNA type intronic
GC content 0.36
exon number 1
gene id G259769
representative True

Chromosome Information


Item Value
chromosome id CI01000062
NCBI id null
chromosome length 4496499
location 1888772 ~ 1889031 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CCAAACAATAGCATAAGTTTGGAGGTGGGACTTCCAGTTTGATCAAACCGGGGCATGTTTGAATTAATTGTTTATAAATCAGTTGCTGAATTTGAAATAGTATACTACCACATAAAGTGGTGTCAAACCCGGAAGACTAATTCGCTCCTGGTTTCCTCAAGATTTTCCTATGGGTTTTTATAATGAAGTTTTTCAATTTATGAGTGAAATAAGGTCTGGTATCTTGGTAAACAAATTGACGATACTTGAGCGTTTTGCTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU294898 lncRNA downstream 42847 1845704 ~ 1845925 (-) True G259755
TU294897 lncRNA downstream 43876 1844663 ~ 1844896 (-) True G259754
TU294893 lncRNA downstream 48880 1839593 ~ 1839892 (-) True G259750
TU294890 lncRNA downstream 50851 1837712 ~ 1837921 (-) True G259747
TU294888 lncRNA downstream 54482 1834059 ~ 1834290 (-) True G259745
TU294923 lncRNA upstream 29398 1918429 ~ 1918736 (-) True G259779
TU294926 lncRNA upstream 51650 1940681 ~ 1940957 (-) True G259782
TU294927 lncRNA upstream 54704 1943735 ~ 1943960 (-) True G259783
TU294929 lncRNA upstream 63776 1952807 ~ 1953018 (-) True G259785
TU294932 lncRNA upstream 84305 1973336 ~ 1973550 (-) True G259788
CI01000062_01787025_01788167.mRNA mRNA downstream 100260 1787016 ~ 1788512 (-) True CI01000062_01787025_01788167
CI01000062_01747676_01766964.mRNA mRNA downstream 121808 1747676 ~ 1766964 (-) True CI01000062_01747676_01766964
CI01000062_01419375_01443524.mRNA mRNA downstream 445073 1419087 ~ 1443699 (-) True CI01000062_01419375_01443524
CI01000062_01401358_01417189.mRNA mRNA downstream 471583 1400405 ~ 1417189 (-) True CI01000062_01401358_01417189
CI01000062_01361295_01382538.mRNA mRNA downstream 506001 1361295 ~ 1382771 (-) True CI01000062_01361295_01382538
CI01000062_02087992_02119506.mRNA mRNA upstream 198940 2087971 ~ 2120066 (-) True CI01000062_02087992_02119506
CI01000062_02287961_02292055.mRNA mRNA upstream 398352 2287383 ~ 2292092 (-) True CI01000062_02287961_02292055
CI01000062_02400091_02406400.mRNA mRNA upstream 510723 2399754 ~ 2406400 (-) True CI01000062_02400091_02406400
CI01000062_02473721_02477346.mRNA mRNA upstream 584503 2473534 ~ 2477346 (-) True CI01000062_02473721_02477346
CI01000062_02488009_02560794.mRNA mRNA upstream 598778 2487809 ~ 2562434 (-) True CI01000062_02488009_02560794
TU293258 other downstream 1873060 13737 ~ 13821 (-) True G258325
TU296692 other upstream 2056404 3945435 ~ 3957385 (-) True G261400

Expression Profile