RNA id: TCONS_00017029


Basic Information

Item Value
RNA id TCONS_00017029
length 5973
RNA type mRNA
GC content 0.43
exon number 8
gene id XLOC_008514
representative False

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 24572926 ~ 24601091 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GTTTCATGAAACGAAAGAGAAAGTATGCTGCTTAGTTACATGGCCGTTTTCGGACGTTTGTGGGCTGGTTGTCCATAGGGGAAGATTATGTTTTGGACTTTTGCAGGCCTTGTTCTTGCACTATGCTTAGGTGTAAGTGGATCACAGACTCTTCCTGATGTGCATTGGCCTCATTGCCGTTTTATGGATGAGAAAGTTCATGTAAATAAAGAGGGTCACATAGAAACTGAGTATATCCAGAGAAAGGCTGTAGTTCAGTTTGGTAAAGATGGGGACAGTGCTTTACACCCCGCCATTACCTTCCTCGTCACAGGCTCTGAAGTGGATATGAGGCATTATTTAGAGGGACGTGAGAACATGATACAATGTGAGATCCGTAGATACAGCACTGGAGGAATAGTAATGCGCTGGCCTGTTGCAGGAGCACAAGAGTATGACGTCTGGTTCACCTGCACATTACGTCATACACAAGGCTTGTTCGTCATCACCACCTTCCTCAGACACACACCTGCAACTCCTGCTCAGGGAAAATTGGACTTTCTACAGTGGATGAAAATCAGTGATGGGGATCTCCTGACAACATCAGCTGCAATGGTTATTTTGACCCGTACTCCCTCTGTTGAGGTGGGATTCTCAAAGGAGCCAGAGCTGCACTGTCAGTTTGCAGTGGATCATAAACTACCTAAAGCAACAGTGGAGTGGAAACTGCAGCGTCACGGCAAGCACATAAAGCTTTTTAGCTACTCCAGTCTCACTGGAAAGACTGAAGGCAGTGgagtgactgtgaaggccattgaAGGTGGAAATGCATCGCTCAAACTTCAGCCTGTCAGAAAACGCAGTGAGGGCACGTATGTCTGCTCTGTGAAGATTCCTCCTCTCAATGGCAGCCATAATATTCCTTTTAGCATAAGTGAACAGCCTCGTGTGTCTCTAAATGTGCCCAACACCTTGGCTATGGCAGCTGGTCAGGACAAGAAGGTGATCTGTGATGCAGAAAGCTACTATCCCCTGGATGTAAACATTGAGTGGTATCTTGAGAGACACAGAGAAAACCCTATGCCTTCATTCCTGAATGTTCGGCACTCCAGTCATCGGCTTAATCAAGATGGCACATATTCGATCTCAGCCTTCCTCTATCTAGAGCCTGGCTTGGAGAACTCTGGATATCAGTACACCTGCAGTGTTTCCCATAAGTCTTTGCTCAACCCAATCAACAAGAGTTTTTTCCTTGTAGTTACAGAAACTGACTCTACCATGTGGTATTTCGCAGTCTTTGGGTTTATAATTTCCATgctgttaataatgcattatattCCACGTATTTTTGCAGGACGAAAATCAGCAAAAAGATATATGAGCTCTTGCCTGGGGGTTTAAAGTACAGCATCGCAGAAATTGATGTCACATCACTCCTTTTCTACATCTGTCTTTCATTACTGCCGTCTCCTCCTGCTGCATCCTTCGCAAAGATCTGGTGATCTACATGTGAAAATGGGGAGTTTCTGAGAGGTGTGATTTCAGATATGGATGTTTATGTCTATTTACAATGGTTAATAAACTACTGCTCTCCATTAACTGAGCATTTACTGTATCATTTTAGTGTCTCCATAATTAATAATGACTGTTTGGAAAGGAATTCATAAATGCAAAGTGCAGAGATCATCCTCATATCAATAACTACATTTGAAGTTACTTAACTTGCTCAGTACTTCTCAAAGTGCCTGCTGCATCACGCTCCAAGAACGATCATTTAGGAGTAAATCTCCATCTTGAACAAATGATCATGTGACTTTTATGTTCACAGATGATGATGCAGCTGATGAATATTATCAAAATGATTTTGCTGAATGACACGCTGTACCAATTCACAAGATTTCCATGCGTTCCCAATCATTAGGCATCTTCGTGTAAAATGACAGCATTAGCTATTCAGTGCTTCCTGTGTTGTGAGGtacaaattgttttttattaacgaTTAAAAGAGTTATAGTAGTTTCCCTGCTTTCTCAAACATAACTACCAACTTTTTTgttatgaaaataaatactatggatgtcaatggttaccatcATTTTCCAAAAGtgctttgtgtttaactgaaaaaagaaactcaggTTGAGGTCTAAGGGAACGACGACAGACTTTTTACtctgcatgaactatcccttaatcATTTGCACCAGTTTCCCAAGAAGTGACATGTTTTCTTGCACACCAGGGATGAAATCTTTACTGTATTTGCAATGTAATTAATGTAATATCATCCTTTTGAAAACTCTGGATGGATATGTTTGATAATAAAAGCCTAATTATTATTCTACTGAACTTTAAAGTTGCATAATTGTTAATAGATATGATTCCACATTTTTTATATGtgattgtataattaaaaaaaaaactttttattcaattgtTTGCTGTAAAAGTCTTCATTCACTGTATTGTCTTTCTTTATACACATAAAAAGGTTGTAGCAAATTTACTCTTTTTCATGAAAATGTGAGATCATCATTTTAAACTGGCTAATAAACAATATTACTATTTACCTACATTTCTGTTGTGTAGTGTCGATTTATCATGAACAAACACAAATTAACAGTGGCCTGATTATAAACGAACATTAAACTACTAAATGTTAACTAATTATGCTTAATGTAGAGTGTTAGCAAATAGATAAATGAAGTGTTAAACCACACAACTGCCATAAACAATTGTTTATTTCAATTCCTTCTGTGAAAACCAAAAGAACAATTTTAAACCGAGAGTGTGACTGACACACATTGGTGCAGTATCATAACTGAGCTATCTTCTGGTGTAGAACAGCTTTCATGTCTGCACACTGCAAATTATCTGCGATTGTAGTGAAGAAATGACGTGTATTGAGTCCCTGCATGGCAGTGCAGCTGTCGGGATATGCTGAGAGCACAGACTCATATTGGGTCAGAATCTCCAGGGCACATAGGAACAGCGCCTCAGGCTGACCAGGTATCATCACCTGCACATGAAGCACATGACAGAAAAGCTGAGTAAAGACAAACAGAACTTCCTGACTGCAAGATTCAGAGGTTTTAGGGGATGCCGTGGTGGACGGCAGGGAAATCTTCTCAGCGACCGAGCTGATAATGCTCCTCATTGCATTGGCGTAAAGCCGTCCGGTATACACCCAGCCTTGAGGTGGCAGCCAATCCGAGCAGCTGGAACTGCAAAGCAGCTGGAAGATTCGCAAAAGAAACACAGAAAGACGCAACTCAACAGAAAAAGAACGTAGGTCAAGTAACGGAAGGAAATCAACATATTCTAAAGAGTATGGCACATACAGTTTGCTTGAATGTACAAGTTCTTGTAACACTTTTAAAAGTCTTTCCCATTCCCCAGATGTGCACCACGGGAGGAGCTGACACACTGCGACTAACAGCCCCTTGCTGAACATGTTCACATCATCCGGTTTCAGCAGGTTAAGGGAGAGAGATTCCAGCATTACCTCGCGGACACTTTCTGACAGAGCGCAGCACTCCAACCAGGCCACAAGTCCAGTACCTTGTCCATACTGCGGCAAGTCCAGGCCAGACCAATCCTGCTCCGGAAGATCACAAACTGCCAACAGAGAGTTTGGAACTTCATACTTGAAATGTTCTCCCCACACATCTTTCAGGTAAAAACGCACAGTCCAGTCCAGTTCCTCCACTTTACTATAGAGCCAAAAGAGAGCTCTCGACCAAACATCAGGTGCACGAGCCACTTCCTTTCCAACGATTGTTCCCATTGTGTGGAGTACAGACAACAGCAGCTCTTTGGTCTCCATGGGCATGGGCGTCTCACCCTCTACTGGCCGGTCCCAGCACCTACTGCACTCATTCAGGAGCTGAGCAAGACAAAATAAAGACGGGAATGGAGAGCAGCTCATTATCCAGTGCGTTGTGTCACTGCTGGTCTCCTGGCTCAGCGTGCACTGAAGAAGTCTGAGACAGATCTGCAAGTTGCTTGAACCTGGAGTTGTTGCTATAAGGTATGGTTGGACAAATACTTGCAAgacttcttctggagaaaggaaGCTCAGCTTTTCTCCAGTGCATCCAGAGATGTTGCACTTCATCAGCTCAGCTAAGAATTGCAGAAACTGGTTCTCCTCCTGAGGTGAGGATAACTTGCTCCACACAGTGTCCTGCAGGCATCTACTCATAAGACTGTCGTTGTGAACTCCAGGTAAAGAAATGAGACCTGGGAGTTGCTGGAGAATCTCAGCTATCAGATTTTGAGCTCCAAGGTTAACAACAGCCATGTGGCAGCATCGCCGCAATGTGGCTTCAGGGTTCTGGAAAGCCACTCGTGCCACAGCAGTGACGGCTGCATCAATGCTGCCTTTGGCACCACTCTGAATGATGCTGTTGAAGGCCAGATTGAGCTCATCAGAGAAGCCTTTAGTCATAGAACAGGGGAGAAATCCGTGAAGACCTTTCCTGGACATGGAAAGCAATTCTGAAAGTGTAGCATTTCGGTCAGACAAGGGCAAGTGGGAAAATATGTCTACGATCACATCCTTTAATCTTTTGCAGTGATCAACGTCAGCATCACTTTGACATTTATGTGTAAGTGTGGAGATCAATGTCATCAGATGGTCTTTGGTTTGAAACACACTTGCATTTCTCTCCAAGCACTGAATCCAGTTTGCTTCATTGAAGTCTTGACTTAGTTTGGAGGCAAACAGTCCAGGAAGGCCTTCAAATCCTTCAAGATGATGATCTAAGATGGTCACacacatttttgctatttcttctgCAGAACTTTCAGGAACTGTGAATGATAAAGATCCCAACAAGCCTTTCAAACTTACTCTCAAGTTATCAAGGGTCTGTCCATTCCCAACCAGGTCTTTAGCATGTGATGGTTCCTCCAGAGACGCCAGAACTCTATCTAGGCTGTCTTTCAGACGCATCACTGTGGCATGTGGCTCATTGCTGGGTGTCTTCAGAAGCCCCATCACCTCCCAGGAGCATATAACCTCAAGTGTGAACTGCATAGCCTGTATGAATGTCATTCCACACGGCTTGGTCTCGGCAGGAATGAGAGCAGCAGCAAGGTCTCTCCGAGCCTCGCGTATGGCCTCAATCAGGCCCAAGTTCTCAATCACTTCACCATTCGCCTTTTTAAGATTCACTGCACGAGATATCTGCTGAAGTTTCATTTCTATGGGGAGATCAGTAACACTGCTTATAAGGTAGCTGGTATACAGCGTGTCCAGACAATTAGAGAGAGCAACATAACACAATTCAGAGGAGGTCAAATGCTCTTTTATTTTCCTCAGCCCCTCAAATAGTATGTTCACCATACATGTGGATGTGGATTCTGGGTCAGGCTTAAATCTTTTAGATGCCTGTGGTGATGGTTCAGTCGTGGACAATGAACGTGAACATTGAGCTGTAAAGAGCTGATCCAAGGCATCTTCACATCCTCTCTTCCCTTTCAGTAGCTCCCACCACACCTCCAGCAAAAGCTTTACGTCTGCCTCTGAGCTGCTGCTTGTCACATGATCAACCAACAACTTGAGCTCTTCACATCGTTCAGATGGTTGAAAGCACAACAGCAGCTCCACATAGATGCTGGAAAAGCTCATGGATTTTATCAGCTCAAACAACACAGGGTGATTAATGTCAGGAAGGCTGTTCTGGACGTCAAATAATGGGTCTTCTTTCCATCTCGTATCAATGTCCTTTCTGTTCCTCACGTCTAAGATCTTGCTCCACACAATACAGAGGATCTTCTTTTTCCAGTGATGTCGATCTTTGGTGTCTTTGAGTGAATGTTCACATATCTCTTTGACCGCGTTAACAATCGGAGGTCCAATCCGATCCCAGTCTTCTTTTCTTAAAGATGAGAGTGGCTCAGGTTGGCATATCTGACTGGCCAGTAGGAATCCTCCCTGTAGCACAGCCGTCTTCTCACAGCTCAGCCATGACTCTAAAACAGAAGACT

Function

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-040801-253 Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in yolk syncytial layer. Orthologous to human DHRS13 (dehydrogenase/reductase 13).

Ensembl:

ensembl_id ENSDART00000155636

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00017026 lncRNA upstream 3864 24563670 ~ 24569062 (+) False XLOC_008513
TCONS_00017028 lncRNA upstream 3995 24565128 ~ 24568931 (+) True XLOC_008513
TCONS_00018958 lncRNA upstream 259804 24312556 ~ 24313122 (+) True XLOC_008511
TCONS_00018776 lncRNA upstream 366945 24179932 ~ 24205981 (+) True XLOC_008508
TCONS_00018777 lncRNA upstream 374429 24191710 ~ 24198497 (+) True XLOC_008509
TCONS_00018960 lncRNA downstream 29618 24616570 ~ 24618644 (+) True XLOC_008515
TCONS_00018961 lncRNA downstream 89961 24676913 ~ 24689697 (+) False XLOC_008517
TCONS_00017037 lncRNA downstream 92707 24679659 ~ 24686682 (+) False XLOC_008517
TCONS_00017038 lncRNA downstream 94544 24681496 ~ 24689697 (+) True XLOC_008517
TCONS_00018962 lncRNA downstream 254339 24841291 ~ 24844913 (+) False XLOC_008522
TCONS_00017024 mRNA upstream 3864 24563504 ~ 24569062 (+) False XLOC_008513
TCONS_00017025 mRNA upstream 3865 24563557 ~ 24569061 (+) False XLOC_008513
TCONS_00017023 mRNA upstream 6532 24563504 ~ 24566394 (+) False XLOC_008513
TCONS_00017022 mRNA upstream 9884 24549054 ~ 24563042 (+) True XLOC_008512
TCONS_00017018 mRNA upstream 28246 24212847 ~ 24544680 (+) False XLOC_008510
TCONS_00017031 mRNA downstream 2011 24588963 ~ 24597953 (+) True XLOC_008514
TCONS_00017032 mRNA downstream 57064 24644016 ~ 24671419 (+) False XLOC_008516
TCONS_00017033 mRNA downstream 57299 24644251 ~ 24670925 (+) True XLOC_008516
TCONS_00017034 mRNA downstream 89953 24676905 ~ 24690260 (+) False XLOC_008517
TCONS_00017036 mRNA downstream 89965 24676917 ~ 24683037 (+) False XLOC_008517
TCONS_00017027 other upstream 3864 24563768 ~ 24569062 (+) False XLOC_008513
TCONS_00016993 other upstream 1122240 23446189 ~ 23450686 (+) True XLOC_008495
TCONS_00016990 other upstream 1194738 23378071 ~ 23378188 (+) True XLOC_008494
TCONS_00016984 other upstream 1810488 22722682 ~ 22762438 (+) False XLOC_008489
TCONS_00016986 other upstream 1839893 22722712 ~ 22733033 (+) False XLOC_008489
TCONS_00017035 other downstream 89961 24676913 ~ 24683290 (+) False XLOC_008517
TCONS_00017050 other downstream 375184 24962136 ~ 24962252 (+) True XLOC_008523
TCONS_00017063 other downstream 882777 25469729 ~ 25469845 (+) True XLOC_008536
TCONS_00017070 other downstream 1048389 25635341 ~ 25656331 (+) True XLOC_008540
TCONS_00017071 other downstream 1080635 25667587 ~ 25667701 (+) True XLOC_008541

Expression Profile

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