RNA id: TU294929



Basic Information


Item Value
RNA id TU294929
length 212
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G259785
representative True

Chromosome Information


Item Value
chromosome id CI01000062
NCBI id null
chromosome length 4496499
location 1952807 ~ 1953018 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GGTGTTCAGCCTTACATTGTTCAAACCGGAGTCGGACACTGATGGAGAGACTCAGGAAGAAGTTACAACTTTTAGAATGCATCTGGACGTTTCTGAATGGTTAGTGGATAAATTTATGTAGTTGCTGTGGAGTTGATTCAACTCATCGACTAGCATGTGCCGTCATGTTAATCTTTTGTGCAAATCCAGTGTTGAATTGACCCTCGTTTGTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU294927 lncRNA downstream 8847 1943735 ~ 1943960 (-) True G259783
TU294926 lncRNA downstream 11850 1940681 ~ 1940957 (-) True G259782
TU294923 lncRNA downstream 34071 1918429 ~ 1918736 (-) True G259779
TU294912 lncRNA downstream 63776 1888772 ~ 1889031 (-) True G259769
TU294898 lncRNA downstream 106882 1845704 ~ 1845925 (-) True G259755
TU294932 lncRNA upstream 20318 1973336 ~ 1973550 (-) True G259788
TU294947 lncRNA upstream 93732 2046750 ~ 2047204 (-) True G259803
TU294983 lncRNA upstream 184567 2137585 ~ 2137792 (-) True G259838
TU294986 lncRNA upstream 194630 2147648 ~ 2147883 (-) True G259841
TU294987 lncRNA upstream 195548 2148566 ~ 2148796 (-) True G259842
CI01000062_01787025_01788167.mRNA mRNA downstream 164295 1787016 ~ 1788512 (-) True CI01000062_01787025_01788167
CI01000062_01747676_01766964.mRNA mRNA downstream 185843 1747676 ~ 1766964 (-) True CI01000062_01747676_01766964
CI01000062_01419375_01443524.mRNA mRNA downstream 509108 1419087 ~ 1443699 (-) True CI01000062_01419375_01443524
CI01000062_01401358_01417189.mRNA mRNA downstream 535618 1400405 ~ 1417189 (-) True CI01000062_01401358_01417189
CI01000062_01361295_01382538.mRNA mRNA downstream 570036 1361295 ~ 1382771 (-) True CI01000062_01361295_01382538
CI01000062_02087992_02119506.mRNA mRNA upstream 134953 2087971 ~ 2120066 (-) True CI01000062_02087992_02119506
CI01000062_02287961_02292055.mRNA mRNA upstream 334365 2287383 ~ 2292092 (-) True CI01000062_02287961_02292055
CI01000062_02400091_02406400.mRNA mRNA upstream 446736 2399754 ~ 2406400 (-) True CI01000062_02400091_02406400
CI01000062_02473721_02477346.mRNA mRNA upstream 520516 2473534 ~ 2477346 (-) True CI01000062_02473721_02477346
CI01000062_02488009_02560794.mRNA mRNA upstream 534791 2487809 ~ 2562434 (-) True CI01000062_02488009_02560794
TU293258 other downstream 1937095 13737 ~ 13821 (-) True G258325
TU296692 other upstream 1992417 3945435 ~ 3957385 (-) True G261400

Expression Profile