RNA id: TU295297



Basic Information


Item Value
RNA id TU295297
length 228
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G260128
representative True

Chromosome Information


Item Value
chromosome id CI01000062
NCBI id null
chromosome length 4496499
location 2254574 ~ 2254801 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GTCTGAATTCACTGATTGTGTCCATGAATCAGGGTATTTCTCCTCTAGAACACAAAAGAAGATTGCGAGCTGGATTTGAACTGGCATCACTGCCACAGCTCCAAGCATTATGGCTCTGATTCTGTCCTGTTTTGTGGTTAAATTTTATCTTAAAAAAGACTTTAAAGTGTCTTGCATACCTGCAAACTCCAAAGTGGTGAAAAAGGTGACATGTTTACAAAGTAGGGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU295280 lncRNA downstream 26065 2228274 ~ 2228509 (-) True G260111
TU295278 lncRNA downstream 31272 2223098 ~ 2223302 (-) True G260109
TU294992 lncRNA downstream 98327 2156048 ~ 2156247 (-) True G259847
TU294988 lncRNA downstream 105389 2148896 ~ 2149185 (-) True G259843
TU294987 lncRNA downstream 105778 2148566 ~ 2148796 (-) True G259842
TU295301 lncRNA upstream 3422 2258223 ~ 2258426 (-) True G260132
TU295305 lncRNA upstream 9224 2264025 ~ 2264241 (-) True G260136
TU295327 lncRNA upstream 42584 2297385 ~ 2297588 (-) True G260153
TU295347 lncRNA upstream 66627 2321428 ~ 2321655 (-) True G260170
TU295348 lncRNA upstream 67457 2322258 ~ 2322478 (-) True G260171
CI01000062_02087992_02119506.mRNA mRNA downstream 134508 2087971 ~ 2120066 (-) True CI01000062_02087992_02119506
CI01000062_01787025_01788167.mRNA mRNA downstream 466062 1787016 ~ 1788512 (-) True CI01000062_01787025_01788167
CI01000062_01747676_01766964.mRNA mRNA downstream 487610 1747676 ~ 1766964 (-) True CI01000062_01747676_01766964
CI01000062_01419375_01443524.mRNA mRNA downstream 810875 1419087 ~ 1443699 (-) True CI01000062_01419375_01443524
CI01000062_01401358_01417189.mRNA mRNA downstream 837385 1400405 ~ 1417189 (-) True CI01000062_01401358_01417189
CI01000062_02287961_02292055.mRNA mRNA upstream 32582 2287383 ~ 2292092 (-) True CI01000062_02287961_02292055
CI01000062_02400091_02406400.mRNA mRNA upstream 144953 2399754 ~ 2406400 (-) True CI01000062_02400091_02406400
CI01000062_02473721_02477346.mRNA mRNA upstream 218733 2473534 ~ 2477346 (-) True CI01000062_02473721_02477346
CI01000062_02488009_02560794.mRNA mRNA upstream 233008 2487809 ~ 2562434 (-) True CI01000062_02488009_02560794
CI01000062_02724898_02725662.mRNA mRNA upstream 469178 2723979 ~ 2726153 (-) True CI01000062_02724898_02725662
TU293258 other downstream 2238862 13737 ~ 13821 (-) True G258325
TU296692 other upstream 1690634 3945435 ~ 3957385 (-) True G261400

Expression Profile