RNA id: TU295347



Basic Information


Item Value
RNA id TU295347
length 228
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G260170
representative True

Chromosome Information


Item Value
chromosome id CI01000062
NCBI id null
chromosome length 4496499
location 2321428 ~ 2321655 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CACATGCCAAGGGCATCTCTTTTCAACATTTCCCATGGAGACTTCTGGAGGTTCCTGGAAAACTACTGTTCATATTGCAAATGGATCAGATGACCCTTTGCAATAGAGGAGGAGCCACCTTGGAGCCCTCCATCTGCTGCCTATCAAGGGAATGAAGATCATCTTCAAGTGTCCTTGCCTTGAAAAGCCCCTGATAGAACAACATGATGGAAGGCAATTAATGATCCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU295327 lncRNA downstream 23840 2297385 ~ 2297588 (-) True G260153
TU295305 lncRNA downstream 57187 2264025 ~ 2264241 (-) True G260136
TU295301 lncRNA downstream 63002 2258223 ~ 2258426 (-) True G260132
TU295297 lncRNA downstream 66627 2254574 ~ 2254801 (-) True G260128
TU295280 lncRNA downstream 92919 2228274 ~ 2228509 (-) True G260111
TU295348 lncRNA upstream 603 2322258 ~ 2322478 (-) True G260171
TU295352 lncRNA upstream 10211 2331866 ~ 2348295 (-) False G260174
TU295351 lncRNA upstream 26267 2347922 ~ 2348295 (-) True G260174
TU295365 lncRNA upstream 31789 2353444 ~ 2353764 (-) True G260187
TU295346 lncRNA upstream 33629 2355284 ~ 2355807 (-) True G260169
CI01000062_02287961_02292055.mRNA mRNA downstream 29336 2287383 ~ 2292092 (-) True CI01000062_02287961_02292055
CI01000062_02087992_02119506.mRNA mRNA downstream 201362 2087971 ~ 2120066 (-) True CI01000062_02087992_02119506
CI01000062_01787025_01788167.mRNA mRNA downstream 532916 1787016 ~ 1788512 (-) True CI01000062_01787025_01788167
CI01000062_01747676_01766964.mRNA mRNA downstream 554464 1747676 ~ 1766964 (-) True CI01000062_01747676_01766964
CI01000062_01419375_01443524.mRNA mRNA downstream 877729 1419087 ~ 1443699 (-) True CI01000062_01419375_01443524
CI01000062_02400091_02406400.mRNA mRNA upstream 78099 2399754 ~ 2406400 (-) True CI01000062_02400091_02406400
CI01000062_02473721_02477346.mRNA mRNA upstream 151879 2473534 ~ 2477346 (-) True CI01000062_02473721_02477346
CI01000062_02488009_02560794.mRNA mRNA upstream 166154 2487809 ~ 2562434 (-) True CI01000062_02488009_02560794
CI01000062_02724898_02725662.mRNA mRNA upstream 402324 2723979 ~ 2726153 (-) True CI01000062_02724898_02725662
CI01000062_03024898_03029604.mRNA mRNA upstream 703224 3024879 ~ 3029696 (-) True CI01000062_03024898_03029604
TU293258 other downstream 2305716 13737 ~ 13821 (-) True G258325
TU296692 other upstream 1623780 3945435 ~ 3957385 (-) True G261400

Expression Profile