RNA id: TU295348



Basic Information


Item Value
RNA id TU295348
length 221
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G260171
representative True

Chromosome Information


Item Value
chromosome id CI01000062
NCBI id null
chromosome length 4496499
location 2322258 ~ 2322478 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GTCCATAATTGTGGGGTACCGACATTAAAATGTGGTGGTTGCTTTAAAATGAAAAGCTTCTTAGTGCAAAGGAACTCCCTGTTAACAAGGCTGTAAATTACACAAGGTCGAAGCAAAGAGAAGAACTTCAGTTCTCTGAGGTGTAAGAAAACAAACCATGGCTACGTTAATACAGATCAATGCTGAAATATTGAAAATGCCCTATGAAAACAACATTATTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU295347 lncRNA downstream 603 2321428 ~ 2321655 (-) True G260170
TU295327 lncRNA downstream 24670 2297385 ~ 2297588 (-) True G260153
TU295305 lncRNA downstream 58017 2264025 ~ 2264241 (-) True G260136
TU295301 lncRNA downstream 63832 2258223 ~ 2258426 (-) True G260132
TU295297 lncRNA downstream 67457 2254574 ~ 2254801 (-) True G260128
TU295352 lncRNA upstream 9388 2331866 ~ 2348295 (-) False G260174
TU295351 lncRNA upstream 25444 2347922 ~ 2348295 (-) True G260174
TU295365 lncRNA upstream 30966 2353444 ~ 2353764 (-) True G260187
TU295346 lncRNA upstream 32806 2355284 ~ 2355807 (-) True G260169
TU295366 lncRNA upstream 34025 2356503 ~ 2356751 (-) True G260188
CI01000062_02287961_02292055.mRNA mRNA downstream 30166 2287383 ~ 2292092 (-) True CI01000062_02287961_02292055
CI01000062_02087992_02119506.mRNA mRNA downstream 202192 2087971 ~ 2120066 (-) True CI01000062_02087992_02119506
CI01000062_01787025_01788167.mRNA mRNA downstream 533746 1787016 ~ 1788512 (-) True CI01000062_01787025_01788167
CI01000062_01747676_01766964.mRNA mRNA downstream 555294 1747676 ~ 1766964 (-) True CI01000062_01747676_01766964
CI01000062_01419375_01443524.mRNA mRNA downstream 878559 1419087 ~ 1443699 (-) True CI01000062_01419375_01443524
CI01000062_02400091_02406400.mRNA mRNA upstream 77276 2399754 ~ 2406400 (-) True CI01000062_02400091_02406400
CI01000062_02473721_02477346.mRNA mRNA upstream 151056 2473534 ~ 2477346 (-) True CI01000062_02473721_02477346
CI01000062_02488009_02560794.mRNA mRNA upstream 165331 2487809 ~ 2562434 (-) True CI01000062_02488009_02560794
CI01000062_02724898_02725662.mRNA mRNA upstream 401501 2723979 ~ 2726153 (-) True CI01000062_02724898_02725662
CI01000062_03024898_03029604.mRNA mRNA upstream 702401 3024879 ~ 3029696 (-) True CI01000062_03024898_03029604
TU293258 other downstream 2306546 13737 ~ 13821 (-) True G258325
TU296692 other upstream 1622957 3945435 ~ 3957385 (-) True G261400

Expression Profile