RNA id: TU295352


Basic Information

Item Value
RNA id TU295352
length 283
lncRNA type inter_gene
GC content 0.48
exon number 3
gene id G260174
representative False

Chromosome Information

Item Value
chromosome id CI01000062
NCBI id null
chromosome length 4496499
location 2331866 ~ 2348295 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ATGGGACCAGGAATACTTCCAGAAACCACTGTCGGTAAACACAGTCCGCCGTGCCATCTGCAGATGCCAACTAAAGAGGAGGGAGACCTTCCAGCATGTCATCAGCGTTCAGTTCAAAAGCCAGCATCTCTGATGGCATAAGTACATACGGTATGGGCAGCTTGCATGTTTTGGAAGGCACTATGAATGCTGAAAGGTATATAAAGGTTTTAGAGCAACATATGCTCCCCTCCAGACGACGACTATTTCAGGGAAGGCCTCGTGTATTTCAGCAGGACAATGC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU295348 lncRNA downstream 9388 2322258 ~ 2322478 (-) True G260171
TU295347 lncRNA downstream 10211 2321428 ~ 2321655 (-) True G260170
TU295327 lncRNA downstream 34278 2297385 ~ 2297588 (-) True G260153
TU295305 lncRNA downstream 67625 2264025 ~ 2264241 (-) True G260136
TU295301 lncRNA downstream 73440 2258223 ~ 2258426 (-) True G260132
TU295365 lncRNA upstream 5149 2353444 ~ 2353764 (-) True G260187
TU295346 lncRNA upstream 6989 2355284 ~ 2355807 (-) True G260169
TU295366 lncRNA upstream 8208 2356503 ~ 2356751 (-) True G260188
TU295372 lncRNA upstream 13483 2361778 ~ 2362096 (-) True G260194
TU295376 lncRNA upstream 17640 2365935 ~ 2366272 (-) True G260198
CI01000062_02287961_02292055.mRNA mRNA downstream 39774 2287383 ~ 2292092 (-) True CI01000062_02287961_02292055
CI01000062_02087992_02119506.mRNA mRNA downstream 211800 2087971 ~ 2120066 (-) True CI01000062_02087992_02119506
CI01000062_01787025_01788167.mRNA mRNA downstream 543354 1787016 ~ 1788512 (-) True CI01000062_01787025_01788167
CI01000062_01747676_01766964.mRNA mRNA downstream 564902 1747676 ~ 1766964 (-) True CI01000062_01747676_01766964
CI01000062_01419375_01443524.mRNA mRNA downstream 888167 1419087 ~ 1443699 (-) True CI01000062_01419375_01443524
CI01000062_02400091_02406400.mRNA mRNA upstream 51459 2399754 ~ 2406400 (-) True CI01000062_02400091_02406400
CI01000062_02473721_02477346.mRNA mRNA upstream 125239 2473534 ~ 2477346 (-) True CI01000062_02473721_02477346
CI01000062_02488009_02560794.mRNA mRNA upstream 139514 2487809 ~ 2562434 (-) True CI01000062_02488009_02560794
CI01000062_02724898_02725662.mRNA mRNA upstream 375684 2723979 ~ 2726153 (-) True CI01000062_02724898_02725662
CI01000062_03024898_03029604.mRNA mRNA upstream 676584 3024879 ~ 3029696 (-) True CI01000062_03024898_03029604
TU293258 other downstream 2316154 13737 ~ 13821 (-) True G258325
TU296692 other upstream 1597140 3945435 ~ 3957385 (-) True G261400

Expression Profile