RNA id: TU295366



Basic Information


Item Value
RNA id TU295366
length 249
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G260188
representative True

Chromosome Information


Item Value
chromosome id CI01000062
NCBI id null
chromosome length 4496499
location 2356503 ~ 2356751 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CTCATGTAATCGAATGTGTTCGAACAGCTACAAAAGACCACCTACTGACCAAATTCTTAAACATTATGGGAAGCGCGCTAACAAGACGGGATTTAAACTTTGTTGGCTGAAGCCCCCAGTTTGGTTTGAAGACGAAAAATGTACCAAGCACAATGTTCTCTCACCATTCCTGATTTCTAACACACACAGCTGTCAAAGCAGAAATGAAAGTTGATGCTCTCCGTGTGTTTTTTCCGTCGTCTCTGGTCG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU295346 lncRNA downstream 696 2355284 ~ 2355807 (-) True G260169
TU295365 lncRNA downstream 2739 2353444 ~ 2353764 (-) True G260187
TU295352 lncRNA downstream 8208 2331866 ~ 2348295 (-) False G260174
TU295351 lncRNA downstream 8208 2347922 ~ 2348295 (-) True G260174
TU295348 lncRNA downstream 34025 2322258 ~ 2322478 (-) True G260171
TU295372 lncRNA upstream 5027 2361778 ~ 2362096 (-) True G260194
TU295376 lncRNA upstream 9184 2365935 ~ 2366272 (-) True G260198
TU295378 lncRNA upstream 15185 2371936 ~ 2372244 (-) True G260200
TU295379 lncRNA upstream 15826 2372577 ~ 2372792 (-) True G260201
TU295380 lncRNA upstream 20458 2377209 ~ 2377683 (-) True G260202
CI01000062_02287961_02292055.mRNA mRNA downstream 64411 2287383 ~ 2292092 (-) True CI01000062_02287961_02292055
CI01000062_02087992_02119506.mRNA mRNA downstream 236437 2087971 ~ 2120066 (-) True CI01000062_02087992_02119506
CI01000062_01787025_01788167.mRNA mRNA downstream 567991 1787016 ~ 1788512 (-) True CI01000062_01787025_01788167
CI01000062_01747676_01766964.mRNA mRNA downstream 589539 1747676 ~ 1766964 (-) True CI01000062_01747676_01766964
CI01000062_01419375_01443524.mRNA mRNA downstream 912804 1419087 ~ 1443699 (-) True CI01000062_01419375_01443524
CI01000062_02400091_02406400.mRNA mRNA upstream 43003 2399754 ~ 2406400 (-) True CI01000062_02400091_02406400
CI01000062_02473721_02477346.mRNA mRNA upstream 116783 2473534 ~ 2477346 (-) True CI01000062_02473721_02477346
CI01000062_02488009_02560794.mRNA mRNA upstream 131058 2487809 ~ 2562434 (-) True CI01000062_02488009_02560794
CI01000062_02724898_02725662.mRNA mRNA upstream 367228 2723979 ~ 2726153 (-) True CI01000062_02724898_02725662
CI01000062_03024898_03029604.mRNA mRNA upstream 668128 3024879 ~ 3029696 (-) True CI01000062_03024898_03029604
TU293258 other downstream 2340791 13737 ~ 13821 (-) True G258325
TU296692 other upstream 1588684 3945435 ~ 3957385 (-) True G261400

Expression Profile