RNA id: TU295572



Basic Information


Item Value
RNA id TU295572
length 233
lncRNA type inter_gene
GC content 0.44
exon number 2
gene id G260383
representative True

Chromosome Information


Item Value
chromosome id CI01000062
NCBI id null
chromosome length 4496499
location 2862494 ~ 2880532 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TGGTTAGTGGATAAATTTATGTAGTCGCTGTGGAGTTGATTCAACTCATCGACTAGCATGTGCCGTCATGTTAATCTTTTGTGTTGAATTGACCCTCGTTTGTGAAGCAGTCCGGCGTAAAATGACGGCATGACAACAACACTACTACAACAACTCTTCCTCTTCTCTAAAGCAGCCCAACATGGCCTCACCCCTTTTGTTGTGTGTTCTCGGGGGCTGGGTTTATGTAAATT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU295550 lncRNA downstream 56185 2806105 ~ 2806309 (-) True G260361
TU295423 lncRNA downstream 299684 2562610 ~ 2562810 (-) True G260245
TU295344 lncRNA downstream 378335 2483099 ~ 2484159 (-) True G260167
TU295335 lncRNA downstream 451522 2407028 ~ 2410972 (-) False G260160
TU295578 lncRNA upstream 4243 2884775 ~ 2885036 (-) True G260389
TU295580 lncRNA upstream 15828 2896360 ~ 2896563 (-) True G260391
TU295607 lncRNA upstream 37919 2918451 ~ 2918683 (-) True G260418
TU296368 lncRNA upstream 121733 3002265 ~ 3002515 (-) True G261119
TU296390 lncRNA upstream 298037 3178569 ~ 3178920 (-) True G261141
CI01000062_02724898_02725662.mRNA mRNA downstream 136341 2723979 ~ 2726153 (-) True CI01000062_02724898_02725662
CI01000062_02488009_02560794.mRNA mRNA downstream 300060 2487809 ~ 2562434 (-) True CI01000062_02488009_02560794
CI01000062_02473721_02477346.mRNA mRNA downstream 385148 2473534 ~ 2477346 (-) True CI01000062_02473721_02477346
CI01000062_02400091_02406400.mRNA mRNA downstream 456094 2399754 ~ 2406400 (-) True CI01000062_02400091_02406400
CI01000062_02287961_02292055.mRNA mRNA downstream 570402 2287383 ~ 2292092 (-) True CI01000062_02287961_02292055
CI01000062_03024898_03029604.mRNA mRNA upstream 144347 3024879 ~ 3029696 (-) True CI01000062_03024898_03029604
CI01000062_03033192_03047656.mRNA mRNA upstream 152115 3032647 ~ 3047847 (-) True CI01000062_03033192_03047656
CI01000062_03067891_03127934.mRNA mRNA upstream 187074 3067606 ~ 3127934 (-) True CI01000062_03067891_03127934
CI01000062_03211594_03253336.mRNA mRNA upstream 330049 3210581 ~ 3253627 (-) False CI01000062_03211594_03253336
CI01000062_03428921_03431581.mRNA mRNA upstream 548389 3428921 ~ 3431581 (-) True CI01000062_03428921_03431581
TU293258 other downstream 2846782 13737 ~ 13821 (-) True G258325
TU296692 other upstream 1064903 3945435 ~ 3957385 (-) True G261400

Expression Profile