RNA id: TU295607



Basic Information


Item Value
RNA id TU295607
length 233
lncRNA type intronic
GC content 0.27
exon number 1
gene id G260418
representative True

Chromosome Information


Item Value
chromosome id CI01000062
NCBI id null
chromosome length 4496499
location 2918451 ~ 2918683 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TGCTAAACTATATAAATATATATATGGGTCAATGACATGACGGGTCATTTTTTTGGCTTTAATAATAATAAAAAAACAAAGATATGACATCCAAAGTATGTAAGGTAGTACAACTAGATCTTTTTTATTAAATCCAAAAGGTTTTAATTATATTTTGCTACATATAAAGGTATTTTAAAGATTTTGAAGTGTCAAAAGGTCATTCGGTTAAACCATCCAAAGGCCAATACAGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU295580 lncRNA downstream 21888 2896360 ~ 2896563 (-) True G260391
TU295578 lncRNA downstream 33415 2884775 ~ 2885036 (-) True G260389
TU295572 lncRNA downstream 37919 2862494 ~ 2880532 (-) True G260383
TU295550 lncRNA downstream 112142 2806105 ~ 2806309 (-) True G260361
TU295423 lncRNA downstream 355641 2562610 ~ 2562810 (-) True G260245
TU296368 lncRNA upstream 83582 3002265 ~ 3002515 (-) True G261119
TU296390 lncRNA upstream 259886 3178569 ~ 3178920 (-) True G261141
TU296412 lncRNA upstream 274705 3193388 ~ 3193908 (-) True G261156
TU296419 lncRNA upstream 280376 3199059 ~ 3199269 (-) True G261163
TU296405 lncRNA upstream 290831 3209514 ~ 3210281 (-) True G261149
CI01000062_02724898_02725662.mRNA mRNA downstream 192298 2723979 ~ 2726153 (-) True CI01000062_02724898_02725662
CI01000062_02488009_02560794.mRNA mRNA downstream 356017 2487809 ~ 2562434 (-) True CI01000062_02488009_02560794
CI01000062_02473721_02477346.mRNA mRNA downstream 441105 2473534 ~ 2477346 (-) True CI01000062_02473721_02477346
CI01000062_02400091_02406400.mRNA mRNA downstream 512051 2399754 ~ 2406400 (-) True CI01000062_02400091_02406400
CI01000062_02287961_02292055.mRNA mRNA downstream 626359 2287383 ~ 2292092 (-) True CI01000062_02287961_02292055
CI01000062_03024898_03029604.mRNA mRNA upstream 106196 3024879 ~ 3029696 (-) True CI01000062_03024898_03029604
CI01000062_03033192_03047656.mRNA mRNA upstream 113964 3032647 ~ 3047847 (-) True CI01000062_03033192_03047656
CI01000062_03067891_03127934.mRNA mRNA upstream 148923 3067606 ~ 3127934 (-) True CI01000062_03067891_03127934
CI01000062_03211594_03253336.mRNA mRNA upstream 291898 3210581 ~ 3253627 (-) False CI01000062_03211594_03253336
CI01000062_03428921_03431581.mRNA mRNA upstream 510238 3428921 ~ 3431581 (-) True CI01000062_03428921_03431581
TU293258 other downstream 2902739 13737 ~ 13821 (-) True G258325
TU296692 other upstream 1026752 3945435 ~ 3957385 (-) True G261400

Expression Profile