Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00017036 |
| length | 724 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 7 |
| gene id | XLOC_008517 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007126.7 |
| NCBI id | CM002899.2 |
| chromosome length | 48040578 |
| location | 24676905 ~ 24690260 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0070987 | error-free translesion synthesis | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0042645 | mitochondrial nucleoid | cellular_component |
| GO:0003677 | DNA binding | molecular_function |
| id | description |
|---|---|
| ko03029 | Mitochondrial biogenesis |
| id | description |
|---|---|
| ZDB-GENE-030131-5881 | Predicted to enable DNA binding activity. Predicted to be involved in error-free translesion synthesis. Predicted to be active in mitochondrial nucleoid and nucleus. Orthologous to human POLDIP2 (DNA polymerase delta interacting protein 2). |
| ensembl_id | ENSDART00000143137 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00018960 | lncRNA | upstream | 58273 | 24616570 ~ 24618644 (+) | True | XLOC_008515 |
| TCONS_00018959 | lncRNA | upstream | 93492 | 24582174 ~ 24583425 (+) | False | XLOC_008514 |
| TCONS_00017026 | lncRNA | upstream | 107855 | 24563670 ~ 24569062 (+) | False | XLOC_008513 |
| TCONS_00017028 | lncRNA | upstream | 107986 | 24565128 ~ 24568931 (+) | True | XLOC_008513 |
| TCONS_00018958 | lncRNA | upstream | 363795 | 24312556 ~ 24313122 (+) | True | XLOC_008511 |
| TCONS_00018962 | lncRNA | downstream | 158254 | 24841291 ~ 24844913 (+) | False | XLOC_008522 |
| TCONS_00018963 | lncRNA | downstream | 159572 | 24842609 ~ 24844913 (+) | True | XLOC_008522 |
| TCONS_00018964 | lncRNA | downstream | 324518 | 25007555 ~ 25053314 (+) | False | XLOC_008524 |
| TCONS_00017051 | lncRNA | downstream | 338048 | 25021085 ~ 25027250 (+) | False | XLOC_008524 |
| TCONS_00018965 | lncRNA | downstream | 338067 | 25021104 ~ 25053314 (+) | False | XLOC_008524 |
| TCONS_00017032 | mRNA | upstream | 5498 | 24644016 ~ 24671419 (+) | False | XLOC_008516 |
| TCONS_00017033 | mRNA | upstream | 5992 | 24644251 ~ 24670925 (+) | True | XLOC_008516 |
| TCONS_00017030 | mRNA | upstream | 75826 | 24572926 ~ 24601091 (+) | False | XLOC_008514 |
| TCONS_00017031 | mRNA | upstream | 78964 | 24588963 ~ 24597953 (+) | True | XLOC_008514 |
| TCONS_00017029 | mRNA | upstream | 89965 | 24572926 ~ 24586952 (+) | False | XLOC_008514 |
| TCONS_00017039 | mRNA | downstream | 8051 | 24691088 ~ 24736305 (+) | False | XLOC_008518 |
| TCONS_00017040 | mRNA | downstream | 21761 | 24704798 ~ 24738121 (+) | False | XLOC_008518 |
| TCONS_00017041 | mRNA | downstream | 54562 | 24737599 ~ 24744920 (+) | True | XLOC_008518 |
| TCONS_00017042 | mRNA | downstream | 63407 | 24746444 ~ 24754895 (+) | False | XLOC_008519 |
| TCONS_00017043 | mRNA | downstream | 66948 | 24749985 ~ 24754214 (+) | True | XLOC_008519 |
| TCONS_00017027 | other | upstream | 107855 | 24563768 ~ 24569062 (+) | False | XLOC_008513 |
| TCONS_00016993 | other | upstream | 1226231 | 23446189 ~ 23450686 (+) | True | XLOC_008495 |
| TCONS_00016990 | other | upstream | 1298729 | 23378071 ~ 23378188 (+) | True | XLOC_008494 |
| TCONS_00016984 | other | upstream | 1914479 | 22722682 ~ 22762438 (+) | False | XLOC_008489 |
| TCONS_00017050 | other | downstream | 279099 | 24962136 ~ 24962252 (+) | True | XLOC_008523 |
| TCONS_00017063 | other | downstream | 786692 | 25469729 ~ 25469845 (+) | True | XLOC_008536 |
| TCONS_00017070 | other | downstream | 952304 | 25635341 ~ 25656331 (+) | True | XLOC_008540 |
| TCONS_00017071 | other | downstream | 984550 | 25667587 ~ 25667701 (+) | True | XLOC_008541 |
| TCONS_00017074 | other | downstream | 1214409 | 25897446 ~ 25897539 (+) | False | XLOC_008543 |
