RNA id: TU296723



Basic Information


Item Value
RNA id TU296723
length 254
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G261430
representative True

Chromosome Information


Item Value
chromosome id CI01000062
NCBI id null
chromosome length 4496499
location 4090257 ~ 4090510 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CTCGTAGTGGACTTCAATGGTCTCCAAACGGTTGAAGGTCAAAATTACAGTTTTAGTGGAGCTTCAAAGGGCTTTAAACGATACCAGACGAGGAATAAGGGTCTTATCTAGCGAAACGATCGGTCATTTTCTAAAAAAAAAAAAATCAAAATGTATATGCTTTATAGGCACAAATGATCGCATTACAAGTGCTTCCACCAAAACGCGATTCCGTATTCTTCAAAAAGCTTACGCTGAATGTCCTACGCCTTCCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU296722 lncRNA downstream 249 4089804 ~ 4090008 (-) True G261429
TU296662 lncRNA downstream 1823 4087342 ~ 4088434 (-) True G261380
TU296712 lncRNA downstream 72888 4017123 ~ 4017369 (-) True G261419
TU296710 lncRNA downstream 74314 4015728 ~ 4015943 (-) True G261417
TU296704 lncRNA downstream 89604 3999421 ~ 4000653 (-) True G261411
TU296755 lncRNA upstream 60625 4151135 ~ 4151468 (-) True G261462
TU296846 lncRNA upstream 217389 4307899 ~ 4308367 (-) True G261529
TU296861 lncRNA upstream 244786 4335296 ~ 4335653 (-) True G261544
TU296876 lncRNA upstream 270477 4360987 ~ 4361217 (-) True G261559
TU296893 lncRNA upstream 289590 4380100 ~ 4380551 (-) True G261576
CI01000062_04070271_04080873.mRNA mRNA downstream 9284 4070271 ~ 4080973 (-) True CI01000062_04070271_04080873
CI01000062_04054548_04067692.mRNA mRNA downstream 22287 4054467 ~ 4067970 (-) True CI01000062_04054548_04067692
CI01000062_04021845_04022218.mRNA mRNA downstream 68039 4021477 ~ 4022218 (-) True CI01000062_04021845_04022218
CI01000062_04005972_04008217.mRNA mRNA downstream 81877 4005916 ~ 4008380 (-) True CI01000062_04005972_04008217
CI01000062_04005001_04005527.mRNA mRNA downstream 84730 4004611 ~ 4005527 (-) True CI01000062_04005001_04005527
CI01000062_04168268_04168705.mRNA mRNA upstream 77758 4168268 ~ 4169119 (-) True CI01000062_04168268_04168705
CI01000062_04170036_04182524.mRNA mRNA upstream 79242 4169752 ~ 4182585 (-) True CI01000062_04170036_04182524
CI01000062_04198997_04247699.mRNA mRNA upstream 107961 4198471 ~ 4247955 (-) True CI01000062_04198997_04247699
CI01000062_04281826_04306521.mRNA mRNA upstream 191177 4281687 ~ 4306849 (-) True CI01000062_04281826_04306521
CI01000062_04318060_04327149.mRNA mRNA upstream 226895 4317405 ~ 4327452 (-) True CI01000062_04318060_04327149
TU296692 other downstream 132872 3945435 ~ 3957385 (-) True G261400
TU293258 other downstream 4074545 13737 ~ 13821 (-) True G258325

Expression Profile