RNA id: TU298670


Basic Information

Item Value
RNA id TU298670
length 465
RNA type TUCP
GC content 0.52
exon number 3
gene id CI01000063_01669384_01670016
representative True

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 1669317 ~ 1672019 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTTTAGGTGGGTAAGTCATTTGACCATAGCACGTCTATTCATTCCAGACATCGATTCAAAATGAGTCTCTCTGCTAAGGACAAAGCCACTGTGAAGGCCCTCTGGGCAAAGATCTCCCCAAAGGCTGAGGACATCGGTAATGAGGCGTTGTCCAGAATGCTTTTGGTCTACCCTCAGACCAAGACCTACTTCTCTCACTGGAGCGACCTGACCCCCGGCTCTGCTCCTGTGAGGAAGCATGGAAAGAAGGTCATCGGTGGACTCGGTTTGGCTATTGAAAAGATCGACGACCTTTTCGGCGGTCTGCTCACTCTTAGCGAGCTGCATGCCTTTCAGCTGAGAGTCGATCCTGCTAACTTCAAGATCCTGTCCCACAACATTCTTGTGGTGTTGTCCATGCTCTTCCCTGATGACTTCACACCTGAAGCCCACCTGGCCATGGACAAGTTCCTTGCAGGAGTGGCC

Function

GO: NA

KEGG:

id description
K13826 HBZ; hemoglobin subunit zeta

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU298853 lncRNA downstream 1567 1666949 ~ 1667844 (-) True G263279
TU298852 lncRNA downstream 3612 1665530 ~ 1665799 (-) True G263278
TU298851 lncRNA downstream 4333 1664634 ~ 1665078 (-) True G263277
TU298847 lncRNA downstream 9441 1659557 ~ 1659970 (-) False G263275
TU298848 lncRNA downstream 9441 1659557 ~ 1659970 (-) True G263275
TU298857 lncRNA upstream 17223 1687299 ~ 1687525 (-) True G263283
TU298860 lncRNA upstream 20682 1690758 ~ 1691170 (-) True G263286
TU298861 lncRNA upstream 21691 1691767 ~ 1692177 (-) False G263287
TU298864 lncRNA upstream 21691 1691767 ~ 1692242 (-) True G263287
TU298858 lncRNA upstream 25478 1695554 ~ 1695729 (-) True G263284
CI01000063_01603848_01622589.mRNA mRNA downstream 46625 1603474 ~ 1622786 (-) True CI01000063_01603848_01622589
CI01000063_01557732_01560541.mRNA mRNA downstream 108870 1557653 ~ 1560541 (-) True CI01000063_01557732_01560541
CI01000063_01554604_01555607.mRNA mRNA downstream 113804 1553980 ~ 1555607 (-) True CI01000063_01554604_01555607
CI01000063_01548731_01553329.mRNA mRNA downstream 116082 1548447 ~ 1553329 (-) True CI01000063_01548731_01553329
CI01000063_01541176_01541412.mRNA mRNA downstream 126840 1541086 ~ 1542571 (-) True CI01000063_01541176_01541412
CI01000063_01682341_01683245.mRNA mRNA upstream 12203 1682279 ~ 1683245 (-) True CI01000063_01682341_01683245
CI01000063_01802070_01805063.mRNA mRNA upstream 131626 1801702 ~ 1805475 (-) True CI01000063_01802070_01805063
CI01000063_01809470_01817028.mRNA mRNA upstream 139319 1809395 ~ 1817028 (-) True CI01000063_01809470_01817028
CI01000063_01856270_01877031.mRNA mRNA upstream 186169 1856245 ~ 1877095 (-) True CI01000063_01856270_01877031
CI01000063_01890725_01899483.mRNA mRNA upstream 220316 1890392 ~ 1899546 (-) True CI01000063_01890725_01899483
TU298810 other upstream 506363 2176439 ~ 2177485 (-) True G263239
TU298801 other upstream 655036 2325112 ~ 2327719 (-) True G263230
TU298806 other upstream 1055683 2725759 ~ 2726535 (-) True CI01000063_02725759_02726399
TU301418 other upstream 3492418 5183279 ~ 5183287 (-) True G265567
TU301411 other upstream 3518327 5190050 ~ 5190617 (-) True G265565

Expression Profile