Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00017057 |
| length | 1095 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 9 |
| gene id | XLOC_008530 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007126.7 |
| NCBI id | CM002899.2 |
| chromosome length | 48040578 |
| location | 25156121 ~ 25169613 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0055085 | transmembrane transport | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0022857 | transmembrane transporter activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-130530-1004 | Predicted to enable transmembrane transporter activity. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. |
| ensembl_id | ENSDART00000189709 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00018966 | lncRNA | upstream | 60823 | 25094836 ~ 25095298 (+) | True | XLOC_008529 |
| TCONS_00017056 | lncRNA | upstream | 86766 | 25063306 ~ 25069355 (+) | True | XLOC_008528 |
| TCONS_00017054 | lncRNA | upstream | 94048 | 25055961 ~ 25062073 (+) | True | XLOC_008526 |
| TCONS_00017055 | lncRNA | upstream | 95467 | 25059584 ~ 25060654 (+) | True | XLOC_008527 |
| TCONS_00017053 | lncRNA | upstream | 101391 | 25028482 ~ 25054730 (+) | True | XLOC_008525 |
| TCONS_00018967 | lncRNA | downstream | 38779 | 25208392 ~ 25209842 (+) | True | XLOC_008531 |
| TCONS_00018968 | lncRNA | downstream | 200954 | 25370567 ~ 25377494 (+) | False | XLOC_008532 |
| TCONS_00018969 | lncRNA | downstream | 201118 | 25370731 ~ 25377494 (+) | False | XLOC_008532 |
| TCONS_00018970 | lncRNA | downstream | 201178 | 25370791 ~ 25377494 (+) | True | XLOC_008532 |
| TCONS_00018971 | lncRNA | downstream | 226288 | 25395901 ~ 25399574 (+) | True | XLOC_008533 |
| TCONS_00017052 | mRNA | upstream | 130305 | 25024685 ~ 25025816 (+) | True | XLOC_008524 |
| TCONS_00017048 | mRNA | upstream | 318466 | 24795536 ~ 24837655 (+) | False | XLOC_008521 |
| TCONS_00017049 | mRNA | upstream | 318744 | 24795546 ~ 24837377 (+) | True | XLOC_008521 |
| TCONS_00017046 | mRNA | upstream | 318877 | 24795473 ~ 24837244 (+) | False | XLOC_008521 |
| TCONS_00017047 | mRNA | upstream | 318881 | 24795485 ~ 24837240 (+) | False | XLOC_008521 |
| TCONS_00017060 | mRNA | downstream | 269101 | 25438714 ~ 25448626 (+) | False | XLOC_008534 |
| TCONS_00017061 | mRNA | downstream | 269493 | 25439106 ~ 25443025 (+) | True | XLOC_008534 |
| TCONS_00017062 | mRNA | downstream | 282479 | 25452092 ~ 25486010 (+) | True | XLOC_008535 |
| TCONS_00017064 | mRNA | downstream | 319793 | 25489406 ~ 25499518 (+) | True | XLOC_008537 |
| TCONS_00017065 | mRNA | downstream | 358677 | 25528290 ~ 25542592 (+) | False | XLOC_008538 |
| TCONS_00017050 | other | upstream | 193869 | 24962136 ~ 24962252 (+) | True | XLOC_008523 |
| TCONS_00017035 | other | upstream | 472831 | 24676913 ~ 24683290 (+) | False | XLOC_008517 |
| TCONS_00017027 | other | upstream | 587059 | 24563768 ~ 24569062 (+) | False | XLOC_008513 |
| TCONS_00016993 | other | upstream | 1705435 | 23446189 ~ 23450686 (+) | True | XLOC_008495 |
| TCONS_00016990 | other | upstream | 1777933 | 23378071 ~ 23378188 (+) | True | XLOC_008494 |
| TCONS_00017063 | other | downstream | 300116 | 25469729 ~ 25469845 (+) | True | XLOC_008536 |
| TCONS_00017070 | other | downstream | 465728 | 25635341 ~ 25656331 (+) | True | XLOC_008540 |
| TCONS_00017071 | other | downstream | 497974 | 25667587 ~ 25667701 (+) | True | XLOC_008541 |
| TCONS_00017074 | other | downstream | 727833 | 25897446 ~ 25897539 (+) | False | XLOC_008543 |
| TCONS_00017075 | other | downstream | 728102 | 25897715 ~ 25897799 (+) | True | XLOC_008543 |
