Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000063_05400578_05406105.mRNA |
| length | 1597 |
| RNA type | mRNA |
| GC content | 0.56 |
| exon number | 5 |
| gene id | CI01000063_05400578_05406105 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000063 |
| NCBI id | null |
| chromosome length | 7808773 |
| location | 5400578 ~ 5406277 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0016787 | hydrolase activity | molecular_function |
| id | description |
|---|---|
| K04461 | PPM1B, PP2CB; protein phosphatase 1B |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU300908 | lncRNA | upstream | 17654 | 5382707 ~ 5382924 (+) | True | G265142 |
| TU300907 | lncRNA | upstream | 18099 | 5382191 ~ 5382479 (+) | True | G265141 |
| TU300860 | lncRNA | upstream | 33312 | 5360934 ~ 5367266 (+) | True | G265094 |
| TU300899 | lncRNA | upstream | 49665 | 5350506 ~ 5350913 (+) | True | G265133 |
| TU300898 | lncRNA | upstream | 50600 | 5349761 ~ 5349978 (+) | True | G265132 |
| TU300942 | lncRNA | downstream | 29122 | 5435399 ~ 5435640 (+) | True | G265173 |
| TU300971 | lncRNA | downstream | 84300 | 5490577 ~ 5490806 (+) | True | G265198 |
| TU300917 | lncRNA | downstream | 201852 | 5608129 ~ 5609833 (+) | False | G265149 |
| TU300918 | lncRNA | downstream | 201852 | 5608129 ~ 5609834 (+) | True | G265149 |
| TU300925 | lncRNA | downstream | 262625 | 5668902 ~ 5689574 (+) | True | G265156 |
| CI01000063_05281800_05302429.mRNA | mRNA | upstream | 98079 | 5280655 ~ 5302499 (+) | True | CI01000063_05281800_05302429 |
| CI01000063_05271158_05276999.mRNA | mRNA | upstream | 123473 | 5271158 ~ 5277105 (+) | True | CI01000063_05271158_05276999 |
| CI01000063_05223875_05227171.mRNA | mRNA | upstream | 173407 | 5223875 ~ 5227171 (+) | True | CI01000063_05223875_05227171 |
| CI01000063_05191319_05197432.mRNA | mRNA | upstream | 203018 | 5191319 ~ 5197560 (+) | True | CI01000063_05191319_05197432 |
| CI01000063_05183819_05187667.mRNA | mRNA | upstream | 212229 | 5183619 ~ 5188349 (+) | True | CI01000063_05183819_05187667 |
| CI01000063_05466326_05468126.mRNA | mRNA | downstream | 59775 | 5466052 ~ 5469282 (+) | True | CI01000063_05466326_05468126 |
| CI01000063_05490285_05556254.mRNA | mRNA | downstream | 84008 | 5490285 ~ 5556462 (+) | True | CI01000063_05490285_05556254 |
| CI01000063_05563124_05584474.mRNA | mRNA | downstream | 156847 | 5563124 ~ 5585104 (+) | True | CI01000063_05563124_05584474 |
| CI01000063_05597755_05613489.mRNA | mRNA | downstream | 191047 | 5597324 ~ 5614646 (+) | False | CI01000063_05597755_05613489 |
| CI01000063_05639341_05650366.mRNA | mRNA | downstream | 233013 | 5639290 ~ 5650682 (+) | True | CI01000063_05639341_05650366 |
| TU297890 | other | upstream | 2686061 | 2713615 ~ 2714517 (+) | True | G262436 |
| TU297877 | other | upstream | 3157613 | 2241408 ~ 2242965 (+) | True | G262423 |
| TU297621 | other | upstream | 4255571 | 1143871 ~ 1145007 (+) | True | G262194 |
| TU297466 | other | upstream | 4690024 | 710173 ~ 710554 (+) | True | G262060 |
| TU297382 | other | upstream | 4733196 | 665800 ~ 667382 (+) | True | G261984 |
| TU301223 | other | downstream | 507506 | 5913783 ~ 5919029 (+) | True | G265391 |
| TU301297 | other | downstream | 929001 | 6335278 ~ 6335601 (+) | True | G265462 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00009379 | False | 5124 | mRNA | 0.41 | 5 | NC_007123.7 | 25467560 ~ 25487244 (+) |
