RNA id: CI01000063_06291489_06291799.mRNA


Basic Information

Item Value
RNA id CI01000063_06291489_06291799.mRNA
length 586
RNA type mRNA
GC content 0.46
exon number 1
gene id CI01000063_06291489_06291799
representative True

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 6291214 ~ 6291799 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CATTCCCCCCTCCTCTCACCACCGCCATCTTAAGTTCCCACCTACCTGAAATTTCCGAGCACTTTTCTTTTACTAAATTCTCGCTGAAGGAGTCGCCATCCGCTTCAAATCGTACTCAATCCGTGTTGAGACTATTCCAAACTGTCTCTCGGTACCCAGTGAGGTACTGGCAGGTTCGTAGGATCAAGTTAAAGAACGGTCCGAGAGAGACTGGGTCCGGAATCGCTGAATCTAGCGGTTGCGGGGAGGAGACTTTCGACGCAGCGAAATGGAGGAACGAACGACTGCTGACCAAGTTGCGGAGCGAATAGACATCTCGCGAGACGTGCTTCAGCGCGCACTTGACTCACTGCAGGCTTCTGAGGCAGTTTCTGCAGCACAGATACCTCAGCCGTTGCTGAAAGTTCACCTTGTTTTTATATTTCTAACAAACCCATGACTTGTTTGCACGGAACTTTATAATACATATTTGTTTTTCCAAACTAGTTTTTAAAAAAAATTCTCTCTCACTGCCTGGCTGGCAGCGGTTTGACAAGGTATAAGTTACTGATATTCTATTCACTCATTTTAGACTACGTTTAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU301881 lncRNA downstream 7368 6283058 ~ 6283846 (-) False G265976
TU301912 lncRNA downstream 31523 6259466 ~ 6259691 (-) True G266006
TU301911 lncRNA downstream 31817 6259195 ~ 6259397 (-) True G266005
TU301908 lncRNA downstream 34499 6255577 ~ 6256715 (-) True G266003
TU301907 lncRNA downstream 35991 6255024 ~ 6255223 (-) True G266002
TU301890 lncRNA upstream 12684 6304483 ~ 6304949 (-) True G265985
TU301922 lncRNA upstream 27762 6319561 ~ 6319837 (-) True G266016
TU301923 lncRNA upstream 28439 6320238 ~ 6320628 (-) True G266017
TU301924 lncRNA upstream 29100 6320899 ~ 6321186 (-) True G266018
TU301948 lncRNA upstream 55082 6346881 ~ 6349001 (-) True G266038
CI01000063_06271330_06273137.mRNA mRNA downstream 18077 6270763 ~ 6273137 (-) True CI01000063_06271330_06273137
CI01000063_06110909_06118565.mRNA mRNA downstream 171295 6110909 ~ 6119919 (-) True CI01000063_06110909_06118565
CI01000063_06018383_06022776.mRNA mRNA downstream 267727 6018083 ~ 6023487 (-) True CI01000063_06018383_06022776
CI01000063_06011344_06017382.mRNA mRNA downstream 273832 6010663 ~ 6017382 (-) True CI01000063_06011344_06017382
CI01000063_05992697_06005239.mRNA mRNA downstream 285855 5992579 ~ 6005359 (-) True CI01000063_05992697_06005239
CI01000063_06332215_06332433.mRNA mRNA upstream 40350 6332149 ~ 6332433 (-) True CI01000063_06332215_06332433
CI01000063_06404520_06407506.mRNA mRNA upstream 112025 6403824 ~ 6407676 (-) True CI01000063_06404520_06407506
CI01000063_06652744_06663333.mRNA mRNA upstream 360337 6652136 ~ 6663590 (-) True CI01000063_06652744_06663333
CI01000063_07092189_07106801.mRNA mRNA upstream 800291 7092090 ~ 7107755 (-) True CI01000063_07092189_07106801
CI01000063_07114269_07117313.mRNA mRNA upstream 821608 7113407 ~ 7117798 (-) True CI01000063_07114269_07117313
TU301878 other downstream 268 6288158 ~ 6290946 (-) True G265976
TU301675 other downstream 674102 5546701 ~ 5546719 (-) True G265781
TU301422 other downstream 1037274 5250835 ~ 5253940 (-) False CI01000063_05252331_05253850
TU301421 other downstream 1037403 5250166 ~ 5253811 (-) False CI01000063_05252331_05253850
TU302824 other upstream 997696 7289495 ~ 7290013 (-) False G266797
TU302823 other upstream 997929 7289728 ~ 7290013 (-) False G266797
TU302826 other upstream 997929 7289728 ~ 7290224 (-) True G266797
TU302679 other upstream 1147286 7439085 ~ 7441435 (-) True G266660

Expression Profile