RNA id: TU298501



Basic Information


Item Value
RNA id TU298501
length 223
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G262970
representative True

Chromosome Information


Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 953157 ~ 953379 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GTTCAGACAGTATCAGAAAACGTTATAAGACTGAACAGAAGCGATTGAATTCTTCTCTATAGAGACTCTGTCTGACTGTTTAATATACTCAAGGCTGTCTGAAATGCAATATACATGCTCCATTCTATTGAAAGCAATATACCTTTGAACATCTAAATGAATAATACACTGCATATGAGACCAGGCTGAGAATATTGAATGTTTCTGTGGCATTGAGGAGAGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU298495 lncRNA downstream 2628 950177 ~ 950529 (-) True G262967
TU298493 lncRNA downstream 4156 948588 ~ 949001 (-) True G262965
TU298492 lncRNA downstream 4943 947952 ~ 948214 (-) True G262964
TU298488 lncRNA downstream 6874 946024 ~ 946283 (-) True G262960
TU298487 lncRNA downstream 7595 945147 ~ 945562 (-) True G262959
TU298382 lncRNA upstream 3343 956722 ~ 971781 (-) True G262876
TU298516 lncRNA upstream 140253 1093632 ~ 1094713 (-) True G262985
TU298519 lncRNA upstream 141968 1095347 ~ 1095623 (-) True G262988
TU298521 lncRNA upstream 144061 1097440 ~ 1098132 (-) True G262990
TU298531 lncRNA upstream 196233 1149612 ~ 1149869 (-) True G262999
CI01000063_00864936_00881531.mRNA mRNA downstream 71626 864319 ~ 881531 (-) True CI01000063_00864936_00881531
CI01000063_00846790_00858096.mRNA mRNA downstream 93779 846622 ~ 859378 (-) True CI01000063_00846790_00858096
CI01000063_00808299_00809636.mRNA mRNA downstream 143521 808060 ~ 809636 (-) True CI01000063_00808299_00809636
CI01000063_00805911_00806593.mRNA mRNA downstream 146525 805911 ~ 806632 (-) True CI01000063_00805911_00806593
CI01000063_00792983_00795702.mRNA mRNA downstream 153943 792436 ~ 799214 (-) True CI01000063_00792983_00795702
CI01000063_00985283_00999270.mRNA mRNA upstream 31142 984521 ~ 999270 (-) True CI01000063_00985283_00999270
CI01000063_01015926_01020021.mRNA mRNA upstream 62547 1015926 ~ 1020021 (-) True CI01000063_01015926_01020021
CI01000063_01023917_01026650.mRNA mRNA upstream 70274 1023653 ~ 1027279 (-) True CI01000063_01023917_01026650
CI01000063_01029007_01032212.mRNA mRNA upstream 75603 1028982 ~ 1032212 (-) True CI01000063_01029007_01032212
CI01000063_01070457_01077403.mRNA mRNA upstream 116844 1070223 ~ 1077862 (-) True CI01000063_01070457_01077403
TU298670 other upstream 716032 1669411 ~ 1670076 (-) True CI01000063_01669384_01670016
TU298810 other upstream 1223060 2176439 ~ 2177485 (-) True G263239
TU298801 other upstream 1371733 2325112 ~ 2327719 (-) True G263230
TU298806 other upstream 1772380 2725759 ~ 2726535 (-) True CI01000063_02725759_02726399
TU301418 other upstream 4209115 5183279 ~ 5183287 (-) True G265567

Expression Profile