RNA id: TU298531


Basic Information

Item Value
RNA id TU298531
length 258
lncRNA type inter_gene
GC content 0.30
exon number 1
gene id G262999
representative True

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 1149612 ~ 1149869 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TGAATGAATGAATGAATGAATGAATGCATGGGTAATTGATTAATAAAGTGCATATTTCAAGATTTAAAGGGATATTGGTTACCATTTTTATCATGATCTAACAATGTGCAATATGTTCTTACAGCATTTATTAACCTTTGTTAATCTTAGTTATTAAAAATGTTCATATTCATGCTCTTAAAGGGATAGTTCACCCAAAAATGAAAATTCTGTCATCATTTACTCACCCTCAAGTAGCTCCAAACCTGTACGAACTTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU298521 lncRNA downstream 51480 1097440 ~ 1098132 (-) True G262990
TU298519 lncRNA downstream 53989 1095347 ~ 1095623 (-) True G262988
TU298516 lncRNA downstream 54899 1093632 ~ 1094713 (-) True G262985
TU298382 lncRNA downstream 177831 956722 ~ 971781 (-) True G262876
TU298501 lncRNA downstream 196233 953157 ~ 953379 (-) True G262970
TU298534 lncRNA upstream 3020 1152889 ~ 1153127 (-) True G263002
TU298536 lncRNA upstream 4530 1154399 ~ 1154613 (-) True G263004
TU298529 lncRNA upstream 5847 1155716 ~ 1155952 (-) True G262997
TU298572 lncRNA upstream 131158 1281027 ~ 1281776 (-) True G263029
TU298563 lncRNA upstream 160872 1310741 ~ 1329440 (-) True G263021
CI01000063_01143887_01144418.mRNA mRNA downstream 4672 1143203 ~ 1144940 (-) True CI01000063_01143887_01144418
CI01000063_01133174_01140538.mRNA mRNA downstream 9074 1133012 ~ 1140538 (-) True CI01000063_01133174_01140538
CI01000063_01115076_01126539.mRNA mRNA downstream 23073 1114647 ~ 1126539 (-) True CI01000063_01115076_01126539
CI01000063_01103201_01112981.mRNA mRNA downstream 36631 1103116 ~ 1112981 (-) True CI01000063_01103201_01112981
CI01000063_01079985_01087813.mRNA mRNA downstream 61799 1079522 ~ 1087813 (-) True CI01000063_01079985_01087813
CI01000063_01170694_01187133.mRNA mRNA upstream 20413 1170282 ~ 1187133 (-) True CI01000063_01170694_01187133
CI01000063_01188049_01192674.mRNA mRNA upstream 38180 1188049 ~ 1192674 (-) True CI01000063_01188049_01192674
CI01000063_01200458_01207989.mRNA mRNA upstream 50519 1200388 ~ 1207989 (-) True CI01000063_01200458_01207989
CI01000063_01216041_01217287.mRNA mRNA upstream 65846 1215715 ~ 1217563 (-) True CI01000063_01216041_01217287
CI01000063_01228002_01232509.mRNA mRNA upstream 76604 1226473 ~ 1232993 (-) True CI01000063_01228002_01232509
TU298670 other upstream 519542 1669411 ~ 1670076 (-) True CI01000063_01669384_01670016
TU298810 other upstream 1026570 2176439 ~ 2177485 (-) True G263239
TU298801 other upstream 1175243 2325112 ~ 2327719 (-) True G263230
TU298806 other upstream 1575890 2725759 ~ 2726535 (-) True CI01000063_02725759_02726399
TU301418 other upstream 4012625 5183279 ~ 5183287 (-) True G265567

Expression Profile