RNA id: TU298740


Basic Information

Item Value
RNA id TU298740
length 359
lncRNA type inter_gene
GC content 0.28
exon number 1
gene id G263178
representative True

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 1535763 ~ 1536121 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AAAACATCAGGTCATTCGGTACAACCGCTATAAAACATGGAAAATTTTGTAGTAATTTAAAAACTTGTACTAAATATAAAATGTTTGATTGTCCTTTTGCTAGCTAGCTAGATATCAGCCTGTTAGCATTGTTTGAAAATATCATCATTCGGTATAACCAGAAGTGTCATTCGGTAAAACCGAAATTTTGGTTAAAAACAAATGACTTTTTTGGTGACAAATTTTGTCCATCTTGTAAAAAATGACAAAAGCAGTGTTAATTGATTATAAAAACCACCTAATCTCATGTTAACACTTAATAAAACTTCAAAATTAAGTATCTCTCCATTATATATATTTTTTTTACACTTTTAAAAACC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU298690 lncRNA downstream 26190 1509308 ~ 1509573 (-) True G263132
TU298672 lncRNA downstream 30813 1500835 ~ 1504950 (-) True G263119
TU298624 lncRNA downstream 161900 1373466 ~ 1373863 (-) True G263081
TU298614 lncRNA downstream 198948 1336594 ~ 1336815 (-) True G263071
TU298609 lncRNA downstream 205491 1330063 ~ 1330272 (-) True CI01000063_01329725_01330246
TU298742 lncRNA upstream 3832 1539953 ~ 1540199 (-) True G263180
TU298693 lncRNA upstream 4364 1540485 ~ 1540792 (-) True G263135
TU298744 lncRNA upstream 26929 1563050 ~ 1563521 (-) True G263182
TU298745 lncRNA upstream 27682 1563803 ~ 1566540 (-) True G263183
TU298685 lncRNA upstream 54580 1590701 ~ 1593377 (-) True G263127
CI01000063_01510130_01526860.mRNA mRNA downstream 7991 1510070 ~ 1527772 (-) True CI01000063_01510130_01526860
CI01000063_01483554_01486900.mRNA mRNA downstream 48863 1483288 ~ 1486900 (-) True CI01000063_01483554_01486900
CI01000063_01473401_01482295.mRNA mRNA downstream 53468 1473401 ~ 1482295 (-) True CI01000063_01473401_01482295
CI01000063_01329725_01330246.mRNA mRNA downstream 205517 1329711 ~ 1330246 (-) False CI01000063_01329725_01330246
CI01000063_01228002_01232509.mRNA mRNA downstream 302770 1226473 ~ 1232993 (-) True CI01000063_01228002_01232509
CI01000063_01541176_01541412.mRNA mRNA upstream 4965 1541086 ~ 1542571 (-) True CI01000063_01541176_01541412
CI01000063_01548731_01553329.mRNA mRNA upstream 12326 1548447 ~ 1553329 (-) True CI01000063_01548731_01553329
CI01000063_01554604_01555607.mRNA mRNA upstream 17859 1553980 ~ 1555607 (-) True CI01000063_01554604_01555607
CI01000063_01557732_01560541.mRNA mRNA upstream 21532 1557653 ~ 1560541 (-) True CI01000063_01557732_01560541
CI01000063_01603848_01622589.mRNA mRNA upstream 67353 1603474 ~ 1622786 (-) True CI01000063_01603848_01622589
TU298670 other upstream 133290 1669411 ~ 1670076 (-) True CI01000063_01669384_01670016
TU298810 other upstream 640318 2176439 ~ 2177485 (-) True G263239
TU298801 other upstream 788991 2325112 ~ 2327719 (-) True G263230
TU298806 other upstream 1189638 2725759 ~ 2726535 (-) True CI01000063_02725759_02726399
TU301418 other upstream 3626373 5183279 ~ 5183287 (-) True G265567

Expression Profile