RNA id: TU298867



Basic Information


Item Value
RNA id TU298867
length 236
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G263290
representative True

Chromosome Information


Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 1704217 ~ 1704452 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GGACTTTCAGATCTCAGCGACTAGGTTTGTTCATTAACCGGCGTTTAGTGTGATGCACCTTCTTCGCAGAAGAAATATATTGTCAAAGCATAACTAAACAGTACGATAGCAATGTGATTTTACATAGTCAAATCCTAAATCCAAACTTTGCGACAACGCTGCAAATAAAAACCATGCTGCCCGCCTCGTAAATTCCCACTCTTAAAGCCCAGCACACACAGGGCGGCGAGTTTCAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU298859 lncRNA downstream 5982 1697770 ~ 1698235 (-) True G263285
TU298858 lncRNA downstream 8488 1695554 ~ 1695729 (-) True G263284
TU298864 lncRNA downstream 11975 1691767 ~ 1692242 (-) True G263287
TU298861 lncRNA downstream 12040 1691767 ~ 1692177 (-) False G263287
TU298860 lncRNA downstream 13047 1690758 ~ 1691170 (-) True G263286
TU298868 lncRNA upstream 825 1705277 ~ 1705482 (-) True G263291
TU298869 lncRNA upstream 3585 1708037 ~ 1708326 (-) True G263292
TU298691 lncRNA upstream 5246 1709698 ~ 1711337 (-) True G263133
TU298871 lncRNA upstream 7664 1712116 ~ 1712372 (-) True G263294
TU298874 lncRNA upstream 18619 1723071 ~ 1723325 (-) True G263297
CI01000063_01682341_01683245.mRNA mRNA downstream 20972 1682279 ~ 1683245 (-) True CI01000063_01682341_01683245
CI01000063_01669384_01670016.mRNA mRNA downstream 32198 1669317 ~ 1672019 (-) False CI01000063_01669384_01670016
CI01000063_01603848_01622589.mRNA mRNA downstream 81431 1603474 ~ 1622786 (-) True CI01000063_01603848_01622589
CI01000063_01557732_01560541.mRNA mRNA downstream 143676 1557653 ~ 1560541 (-) True CI01000063_01557732_01560541
CI01000063_01554604_01555607.mRNA mRNA downstream 148610 1553980 ~ 1555607 (-) True CI01000063_01554604_01555607
CI01000063_01802070_01805063.mRNA mRNA upstream 97250 1801702 ~ 1805475 (-) True CI01000063_01802070_01805063
CI01000063_01809470_01817028.mRNA mRNA upstream 104943 1809395 ~ 1817028 (-) True CI01000063_01809470_01817028
CI01000063_01856270_01877031.mRNA mRNA upstream 151793 1856245 ~ 1877095 (-) True CI01000063_01856270_01877031
CI01000063_01890725_01899483.mRNA mRNA upstream 185940 1890392 ~ 1899546 (-) True CI01000063_01890725_01899483
CI01000063_01915989_01944590.mRNA mRNA upstream 210971 1915423 ~ 1944590 (-) True CI01000063_01915989_01944590
TU298670 other downstream 34141 1669411 ~ 1670076 (-) True CI01000063_01669384_01670016
TU298810 other upstream 471987 2176439 ~ 2177485 (-) True G263239
TU298801 other upstream 620660 2325112 ~ 2327719 (-) True G263230
TU298806 other upstream 1021307 2725759 ~ 2726535 (-) True CI01000063_02725759_02726399
TU301418 other upstream 3458042 5183279 ~ 5183287 (-) True G265567
TU301411 other upstream 3483951 5190050 ~ 5190617 (-) True G265565

Expression Profile