RNA id: TU298939



Basic Information


Item Value
RNA id TU298939
length 213
lncRNA type inter_gene
GC content 0.26
exon number 1
gene id G263350
representative True

Chromosome Information


Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 1901329 ~ 1901541 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TGAACTACCAGTAAAATTGATAAAAAATTTGGAACCAAAAATTATTGAGACACTTTGACCTGACCATGTTTTGCTTAAGTGTTATCTGACATAATTAAGATTATTTTTTTTCTGACACAAGTTAAACTGAGATCTTGTCATATTTTATTACCATTTTTTTTTTAAACTATAGTGAATTAACTGTATTAATGAATGAAATGTTCAAGGTGTCTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU298827 lncRNA downstream 45943 1855014 ~ 1855386 (-) True G263256
TU298789 lncRNA downstream 47207 1849945 ~ 1854122 (-) True G263218
TU298934 lncRNA downstream 57794 1843298 ~ 1843535 (-) True G263345
TU298926 lncRNA downstream 61726 1839291 ~ 1839603 (-) True G263340
TU298925 lncRNA downstream 62464 1838660 ~ 1838865 (-) True G263339
TU298945 lncRNA upstream 8607 1910148 ~ 1910370 (-) True G263356
TU298831 lncRNA upstream 48306 1949847 ~ 1988854 (-) True G263260
TU298983 lncRNA upstream 94225 1995766 ~ 1996104 (-) True G263394
TU298994 lncRNA upstream 118822 2020363 ~ 2020602 (-) True G263405
TU298765 lncRNA upstream 451641 2353182 ~ 2356169 (-) True G263201
CI01000063_01890725_01899483.mRNA mRNA downstream 1783 1890392 ~ 1899546 (-) True CI01000063_01890725_01899483
CI01000063_01856270_01877031.mRNA mRNA downstream 24234 1856245 ~ 1877095 (-) True CI01000063_01856270_01877031
CI01000063_01809470_01817028.mRNA mRNA downstream 84301 1809395 ~ 1817028 (-) True CI01000063_01809470_01817028
CI01000063_01802070_01805063.mRNA mRNA downstream 95854 1801702 ~ 1805475 (-) True CI01000063_01802070_01805063
CI01000063_01682341_01683245.mRNA mRNA downstream 218084 1682279 ~ 1683245 (-) True CI01000063_01682341_01683245
CI01000063_01915989_01944590.mRNA mRNA upstream 13882 1915423 ~ 1944590 (-) True CI01000063_01915989_01944590
CI01000063_02032344_02033792.mRNA mRNA upstream 129987 2031528 ~ 2033999 (-) True CI01000063_02032344_02033792
CI01000063_02041246_02172429.mRNA mRNA upstream 139705 2041246 ~ 2172429 (-) True CI01000063_02041246_02172429
CI01000063_02174216_02175916.mRNA mRNA upstream 272372 2173913 ~ 2176162 (-) True CI01000063_02174216_02175916
CI01000063_02177769_02178239.mRNA mRNA upstream 276206 2177747 ~ 2178395 (-) False CI01000063_02177769_02178239
TU298670 other downstream 231253 1669411 ~ 1670076 (-) True CI01000063_01669384_01670016
TU298810 other upstream 274898 2176439 ~ 2177485 (-) True G263239
TU298801 other upstream 423571 2325112 ~ 2327719 (-) True G263230
TU298806 other upstream 824218 2725759 ~ 2726535 (-) True CI01000063_02725759_02726399
TU301418 other upstream 3260953 5183279 ~ 5183287 (-) True G265567
TU301411 other upstream 3286862 5190050 ~ 5190617 (-) True G265565

Expression Profile