RNA id: TU298983


Basic Information

Item Value
RNA id TU298983
length 339
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G263394
representative True

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 1995766 ~ 1996104 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TCATAACATTATTCAGGAGCACAAATGAAGCTAAAAAAACCTGACAGTAACAAAAAGGTATTATTAGAATTTCCAAAACTGCCACTCAGGTCTTAATTACTGCGGTAGACTAAAGGACCGCTATGAATATTATTACAGCTCAAGTCCCTCCGGTGATGACCTGTCTTACGACCCATCATGGTTTATGTATCAATCTGAATCTCCATGTTCTGAGCTTCTTCTGAGGTATACTTTAAAGGGCCATTCACATAGGAAGCTTTCCAAAAAAAGCTAGACAGAGTGCGGCAGAATGGAAGAGAATGCAGAGGTTTCTATTTTTTGTTTTGTTTTTAAAAGACA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU298831 lncRNA downstream 6912 1949847 ~ 1988854 (-) True G263260
TU298945 lncRNA downstream 85396 1910148 ~ 1910370 (-) True G263356
TU298939 lncRNA downstream 94225 1901329 ~ 1901541 (-) True G263350
TU298827 lncRNA downstream 140380 1855014 ~ 1855386 (-) True G263256
TU298789 lncRNA downstream 141644 1849945 ~ 1854122 (-) True G263218
TU298994 lncRNA upstream 24259 2020363 ~ 2020602 (-) True G263405
TU298765 lncRNA upstream 357078 2353182 ~ 2356169 (-) True G263201
TU298774 lncRNA upstream 370917 2367021 ~ 2369202 (-) False G263207
TU298775 lncRNA upstream 372679 2368783 ~ 2369202 (-) True G263207
TU299019 lncRNA upstream 384308 2380412 ~ 2381248 (-) True G263430
CI01000063_01915989_01944590.mRNA mRNA downstream 51176 1915423 ~ 1944590 (-) True CI01000063_01915989_01944590
CI01000063_01890725_01899483.mRNA mRNA downstream 96220 1890392 ~ 1899546 (-) True CI01000063_01890725_01899483
CI01000063_01856270_01877031.mRNA mRNA downstream 118671 1856245 ~ 1877095 (-) True CI01000063_01856270_01877031
CI01000063_01809470_01817028.mRNA mRNA downstream 178738 1809395 ~ 1817028 (-) True CI01000063_01809470_01817028
CI01000063_01802070_01805063.mRNA mRNA downstream 190291 1801702 ~ 1805475 (-) True CI01000063_01802070_01805063
CI01000063_02032344_02033792.mRNA mRNA upstream 35424 2031528 ~ 2033999 (-) True CI01000063_02032344_02033792
CI01000063_02041246_02172429.mRNA mRNA upstream 45142 2041246 ~ 2172429 (-) True CI01000063_02041246_02172429
CI01000063_02174216_02175916.mRNA mRNA upstream 177809 2173913 ~ 2176162 (-) True CI01000063_02174216_02175916
CI01000063_02177769_02178239.mRNA mRNA upstream 181643 2177747 ~ 2178395 (-) False CI01000063_02177769_02178239
CI01000063_02180702_02195010.mRNA mRNA upstream 184580 2180684 ~ 2195350 (-) True CI01000063_02180702_02195010
TU298670 other downstream 325690 1669411 ~ 1670076 (-) True CI01000063_01669384_01670016
TU298810 other upstream 180335 2176439 ~ 2177485 (-) True G263239
TU298801 other upstream 329008 2325112 ~ 2327719 (-) True G263230
TU298806 other upstream 729655 2725759 ~ 2726535 (-) True CI01000063_02725759_02726399
TU301418 other upstream 3166390 5183279 ~ 5183287 (-) True G265567
TU301411 other upstream 3192299 5190050 ~ 5190617 (-) True G265565

Expression Profile