RNA id: TU299036



Basic Information


Item Value
RNA id TU299036
length 247
lncRNA type intronic
GC content 0.29
exon number 1
gene id G263443
representative True

Chromosome Information


Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 2435511 ~ 2435757 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TGAGTCAAATGTATATGTACACAAAGGTGTGTTTTCTAGCAGAAACATTCTTAAAACCTTCTTAATAAGTCATTTTGTGATTGTTTAAAAATGTGTAAACAAATAAACACAAAAAAAAGCCACACTAGGATACAGTAAAACAAGAGTTGGCTATATTACAAGAGTAAATATATTTGGCAAGGGCAAGATGTTTAAAACGCTATGAATTTGATCAATCATCAATTTATAGATCAGAATTGTTGTCCAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU299035 lncRNA downstream 200 2435100 ~ 2435311 (-) True G263442
TU298821 lncRNA downstream 3420 2431377 ~ 2432091 (-) True G263250
TU299026 lncRNA downstream 9875 2424910 ~ 2425636 (-) True CI01000063_02416343_02425379
TU299022 lncRNA downstream 52088 2381346 ~ 2383423 (-) True G263431
TU299019 lncRNA downstream 54263 2380412 ~ 2381248 (-) True G263430
TU299037 lncRNA upstream 349 2436106 ~ 2436318 (-) True G263444
TU299040 lncRNA upstream 1715 2437472 ~ 2437811 (-) True G263447
TU299041 lncRNA upstream 2643 2438400 ~ 2438887 (-) True G263448
TU299042 lncRNA upstream 4945 2440702 ~ 2441119 (-) True G263449
TU299044 lncRNA upstream 21932 2457689 ~ 2457888 (-) True G263451
CI01000063_02416343_02425379.mRNA mRNA downstream 9971 2416273 ~ 2425540 (-) False CI01000063_02416343_02425379
CI01000063_02404812_02415053.mRNA mRNA downstream 20458 2404142 ~ 2415053 (-) True CI01000063_02404812_02415053
CI01000063_02357993_02360597.mRNA mRNA downstream 74914 2357926 ~ 2360597 (-) True CI01000063_02357993_02360597
CI01000063_02326799_02327290.mRNA mRNA downstream 108221 2326741 ~ 2327290 (-) False CI01000063_02326799_02327290
CI01000063_02321620_02324262.mRNA mRNA downstream 110946 2321544 ~ 2324565 (-) True CI01000063_02321620_02324262
CI01000063_02444203_02454140.mRNA mRNA upstream 8392 2444149 ~ 2454281 (-) True CI01000063_02444203_02454140
CI01000063_02496694_02509735.mRNA mRNA upstream 60255 2496012 ~ 2509735 (-) True CI01000063_02496694_02509735
CI01000063_02512138_02519529.mRNA mRNA upstream 76175 2511932 ~ 2519537 (-) True CI01000063_02512138_02519529
CI01000063_02580025_02597121.mRNA mRNA upstream 144120 2579877 ~ 2597249 (-) True CI01000063_02580025_02597121
CI01000063_02621471_02632801.mRNA mRNA upstream 184894 2620651 ~ 2632801 (-) True CI01000063_02621471_02632801
TU298801 other downstream 107792 2325112 ~ 2327719 (-) True G263230
TU298810 other downstream 257175 2176439 ~ 2177485 (-) True G263239
TU298670 other downstream 765435 1669411 ~ 1670076 (-) True CI01000063_01669384_01670016
TU298806 other upstream 290002 2725759 ~ 2726535 (-) True CI01000063_02725759_02726399
TU301418 other upstream 2726737 5183279 ~ 5183287 (-) True G265567
TU301411 other upstream 2752646 5190050 ~ 5190617 (-) True G265565
TU301419 other upstream 2814248 5250005 ~ 5253811 (-) False CI01000063_05252331_05253850
TU301420 other upstream 2814302 5250059 ~ 5253811 (-) False CI01000063_05252331_05253850

Expression Profile