RNA id: TU300263



Basic Information


Item Value
RNA id TU300263
length 212
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G264581
representative True

Chromosome Information


Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 3646365 ~ 3646576 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GGAGGTGTGAGAGGTGAGTCTTTGTATTAAAGGAGCCGAGAGTCTTATGTTGAGATAACTTGCGTGTCTCACTGCCTTTGATGCATCACATGGGTGCGTCATAGCACTGTCAGCTTTGTAATTGAGTTGACGTCATAACGCTGATGTTTGTGTTTGTATGTAGGTGAAAGTGGAAGTGTTCAAACAGCTGCACAGGTAAACATTACATGTCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU300262 lncRNA downstream 965 3645165 ~ 3645400 (-) True G264580
TU300261 lncRNA downstream 1928 3644140 ~ 3644437 (-) True G264579
TU300259 lncRNA downstream 2724 3643293 ~ 3643641 (-) True G264577
TU300258 lncRNA downstream 3770 3642346 ~ 3642595 (-) True G264576
TU300257 lncRNA downstream 4584 3641530 ~ 3641781 (-) True G264575
TU300264 lncRNA upstream 2918 3649494 ~ 3649732 (-) True G264582
TU300082 lncRNA upstream 15023 3661599 ~ 3663901 (-) True G264404
TU300084 lncRNA upstream 150647 3797223 ~ 3800537 (-) True G264406
TU300275 lncRNA upstream 155475 3802051 ~ 3802307 (-) True G264593
TU300061 lncRNA upstream 158861 3805437 ~ 3807805 (-) True G264383
CI01000063_03628232_03633396.mRNA mRNA downstream 12919 3628077 ~ 3633446 (-) False CI01000063_03628232_03633396
CI01000063_03615200_03619061.mRNA mRNA downstream 25929 3615136 ~ 3620436 (-) True CI01000063_03615200_03619061
CI01000063_03426029_03462400.mRNA mRNA downstream 182467 3425606 ~ 3463898 (-) True CI01000063_03426029_03462400
CI01000063_03373714_03386774.mRNA mRNA downstream 259591 3373043 ~ 3386774 (-) True CI01000063_03373714_03386774
CI01000063_03296061_03306819.mRNA mRNA downstream 339546 3295934 ~ 3306819 (-) True CI01000063_03296061_03306819
CI01000063_03667811_03688065.mRNA mRNA upstream 20965 3667541 ~ 3688065 (-) True CI01000063_03667811_03688065
CI01000063_03695944_03716188.mRNA mRNA upstream 49368 3695944 ~ 3716188 (-) True CI01000063_03695944_03716188
CI01000063_03742908_03771506.mRNA mRNA upstream 96040 3742616 ~ 3771506 (-) True CI01000063_03742908_03771506
CI01000063_03772788_03776821.mRNA mRNA upstream 126040 3772616 ~ 3776821 (-) True CI01000063_03772788_03776821
CI01000063_03784602_03791834.mRNA mRNA upstream 137018 3783594 ~ 3791834 (-) True CI01000063_03784602_03791834
TU298806 other downstream 919830 2725759 ~ 2726535 (-) True CI01000063_02725759_02726399
TU298801 other downstream 1318646 2325112 ~ 2327719 (-) True G263230
TU298810 other downstream 1468029 2176439 ~ 2177485 (-) True G263239
TU298670 other downstream 1976289 1669411 ~ 1670076 (-) True CI01000063_01669384_01670016
TU301418 other upstream 1515918 5183279 ~ 5183287 (-) True G265567
TU301411 other upstream 1541827 5190050 ~ 5190617 (-) True G265565
TU301419 other upstream 1603429 5250005 ~ 5253811 (-) False CI01000063_05252331_05253850
TU301420 other upstream 1603483 5250059 ~ 5253811 (-) False CI01000063_05252331_05253850
TU301421 other upstream 1603590 5250166 ~ 5253811 (-) False CI01000063_05252331_05253850

Expression Profile