RNA id: TU299861


Basic Information

Item Value
RNA id TU299861
length 358
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G264188
representative True

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 4437657 ~ 4438014 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TGATTACATAAAAAGTGGGTGTGCTCTGGGGCTCCACCTTCACTGACATGGTGATCTTTTCAGATTCATTTGTTTGCTCAGTCTATCAAGGTTAAGTAAGAGTAAAAACATGAATATACTGGAATGGCGAAATGCAGAAGTGGTGCAAACACATCTATGGCCTTGTTTACTCCTGGTATTAAGATGCGTTTTGGTCAATTGGATCTCAAGTGAACGACACTTAATACAGTTGTAAACGGGGTCTAAAACATTTTGAACTTGTCCACTTTCGACCACTTCCAGAGGTAGTCTAAAACGCATTCGACCGGATTGCTTTCATAGTGTAAATGCTTATGTGGTTGAATGTGTTGAAACAGCG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU299850 lncRNA upstream 25166 4412153 ~ 4412491 (+) True G264177
TU299847 lncRNA upstream 27590 4409688 ~ 4410067 (+) True G264174
TU299845 lncRNA upstream 31386 4406032 ~ 4406271 (+) True G264172
TU299844 lncRNA upstream 33314 4403872 ~ 4404343 (+) True G264171
TU299835 lncRNA upstream 37190 4394868 ~ 4400467 (+) True G264162
TU299870 lncRNA downstream 22691 4460705 ~ 4460934 (+) True G264197
TU299873 lncRNA downstream 25235 4463249 ~ 4463630 (+) True G264200
TU299837 lncRNA downstream 27375 4465389 ~ 4465946 (+) True G264164
TU299830 lncRNA downstream 31850 4469864 ~ 4472975 (+) True G264158
TU299877 lncRNA downstream 55776 4493790 ~ 4494096 (+) True G264204
CI01000063_04345980_04349791.mRNA mRNA upstream 87421 4345980 ~ 4350236 (+) True CI01000063_04345980_04349791
CI01000063_04310020_04338879.mRNA mRNA upstream 98639 4310020 ~ 4339018 (+) True CI01000063_04310020_04338879
CI01000063_04168036_04180451.mRNA mRNA upstream 257141 4166544 ~ 4180516 (+) True CI01000063_04168036_04180451
CI01000063_04026940_04034428.mRNA mRNA upstream 402954 4026940 ~ 4034703 (+) True CI01000063_04026940_04034428
CI01000063_03991410_04022994.mRNA mRNA upstream 413958 3991301 ~ 4023699 (+) True CI01000063_03991410_04022994
CI01000063_04479946_04487899.mRNA mRNA downstream 41810 4479824 ~ 4487907 (+) True CI01000063_04479946_04487899
CI01000063_04524187_04533040.mRNA mRNA downstream 85440 4523454 ~ 4533366 (+) True CI01000063_04524187_04533040
CI01000063_04544999_04552162.mRNA mRNA downstream 106028 4544042 ~ 4552265 (+) True CI01000063_04544999_04552162
CI01000063_04568412_04568747.mRNA mRNA downstream 130270 4568284 ~ 4569210 (+) True CI01000063_04568412_04568747
CI01000063_04594405_04629754.mRNA mRNA downstream 156391 4594405 ~ 4630452 (+) True CI01000063_04594405_04629754
TU297890 other upstream 1723140 2713615 ~ 2714517 (+) True G262436
TU297877 other upstream 2194692 2241408 ~ 2242965 (+) True G262423
TU297621 other upstream 3292650 1143871 ~ 1145007 (+) True G262194
TU297466 other upstream 3727103 710173 ~ 710554 (+) True G262060
TU297382 other upstream 3770275 665800 ~ 667382 (+) True G261984
TU301223 other downstream 1475769 5913783 ~ 5919029 (+) True G265391
TU301297 other downstream 1897264 6335278 ~ 6335601 (+) True G265462

Expression Profile