RNA id: TU302742


Basic Information

Item Value
RNA id TU302742
length 214
lncRNA type inter_gene
GC content 0.54
exon number 1
gene id G266722
representative True

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 7024392 ~ 7024605 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GAAGGGGTCCCTTTTAAGGGAGCGTGGCTAAGGGGCCCGAAAGCACCCCAGCCGGTCACTTCTCAGGGGAACAAAGTCAACCCCGAATGCCACCAGGGAGGCTGACCTGGCTTCTAGCTGAACTAGTAACCTAGTCTGCCAACAACCTGTCTGTTTCCTCAGAAACAGAGTCTCTAGACACAGAAGTCTCACAAAGAGACATCCAGAAAGAGGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU302653 lncRNA downstream 91968 6932077 ~ 6932424 (-) True G266642
TU302652 lncRNA downstream 95066 6928846 ~ 6929326 (-) True G266641
TU302478 lncRNA downstream 313243 6669392 ~ 6711149 (-) False G266498
TU302479 lncRNA downstream 352628 6669392 ~ 6671764 (-) True G266498
TU302477 lncRNA downstream 356103 6666329 ~ 6668289 (-) True G266497
TU302760 lncRNA upstream 31465 7056070 ~ 7056307 (-) True G266740
TU302766 lncRNA upstream 43430 7068035 ~ 7068248 (-) True G266746
TU302678 lncRNA upstream 53746 7078351 ~ 7124028 (-) True G266659
TU302710 lncRNA upstream 182549 7207154 ~ 7207868 (-) True CI01000063_07205887_07209986
TU302792 lncRNA upstream 200612 7225217 ~ 7225417 (-) True G266772
CI01000063_06652744_06663333.mRNA mRNA downstream 360802 6652136 ~ 6663590 (-) True CI01000063_06652744_06663333
CI01000063_06404520_06407506.mRNA mRNA downstream 616716 6403824 ~ 6407676 (-) True CI01000063_06404520_06407506
CI01000063_06332215_06332433.mRNA mRNA downstream 691959 6332149 ~ 6332433 (-) True CI01000063_06332215_06332433
CI01000063_06291489_06291799.mRNA mRNA downstream 732593 6291214 ~ 6291799 (-) True CI01000063_06291489_06291799
CI01000063_06271330_06273137.mRNA mRNA downstream 751255 6270763 ~ 6273137 (-) True CI01000063_06271330_06273137
CI01000063_07092189_07106801.mRNA mRNA upstream 67485 7092090 ~ 7107755 (-) True CI01000063_07092189_07106801
CI01000063_07114269_07117313.mRNA mRNA upstream 88802 7113407 ~ 7117798 (-) True CI01000063_07114269_07117313
CI01000063_07147043_07192035.mRNA mRNA upstream 121401 7146006 ~ 7192035 (-) True CI01000063_07147043_07192035
CI01000063_07205887_07209986.mRNA mRNA upstream 181250 7205855 ~ 7210671 (-) False CI01000063_07205887_07209986
CI01000063_07217465_07224133.mRNA mRNA upstream 192381 7216986 ~ 7224322 (-) True CI01000063_07217465_07224133
TU301878 other downstream 733446 6288158 ~ 6290946 (-) True G265976
TU301675 other downstream 1407280 5546701 ~ 5546719 (-) True G265781
TU301422 other downstream 1770452 5250835 ~ 5253940 (-) False CI01000063_05252331_05253850
TU301417 other downstream 1770581 5250835 ~ 5253811 (-) False CI01000063_05252331_05253850
TU302824 other upstream 264890 7289495 ~ 7290013 (-) False G266797
TU302823 other upstream 265123 7289728 ~ 7290013 (-) False G266797
TU302826 other upstream 265123 7289728 ~ 7290224 (-) True G266797
TU302679 other upstream 414480 7439085 ~ 7441435 (-) True G266660

Expression Profile